Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0633 ATGGCCAAGGAAGCTTCTCTATGCCTCTTCTTCCTCTCTTTTCTCTTTATCTGCTGTTCAGGTATTTTGGTGGGTTTTTCCTATCGTGAGAGAGGAGACACCGCATCTTCAACAGCTGATGGAACCACATTCCTTCAGAAAAACAAGATCTCCCAATCTCAGATTCCATTTTCTGTATTGACTAACGCCAACATGTCAGTTGATTTCTTCTTGAATAGAAGCTTCGTTGAAATTTTTTTTTCTTCAAAACCATCTGTAGTTTCGTGGCTAAAAGCTCATCTTGTAAACATTCTTCCACAAGCTGACATTAGAAGCATCATTATTAGTTGTGGCAGTGAGTGCTTAGGCCAAAATGAGATGCCTTTACTTGTTTCTACTCTGAAATCAATCCATTTATTTCTCAGCAACCTTCACACAAGCAGAGAAGTAAAAGTCTCAGTAGCATTTCCAGTATCAATCATAGAGAATTTGAATGCATCATATGAAAATGATCTCCTTAGGACTGTTCAGTTTATAAAGAAAATAAAATCATTTATCATAATAGAAGACAGCACTAATTGGGAATTAAGCATGGAGAATCACTTTGTTCAATCTATTATTAGAAGGGCCACTCTTGCTGCTTCTATTCTTCCATGCAAAGATGTTCCTGTGGTTCTGACAATCAAGAGCCAAGTTATTCACAGTTCAATGGAATTAACTCAATTTAGTAAGGCAGTATCCAAATATCTTGAATCAAGATCTCATGTTACAAAAAGAATAGTTGCATTATATGCTGATGTACACACAACCAAAAATTTGGCAAAGAAAAAGCTCAAAGAAAAAGAGGAAGAAGAGATATTTCCTTTGTCCCTTGGAGAAAAGCTAAGCAAAGTCCATATCAGAAGAATTCTACAAGATACAAACAACTCACCTACCGCAGTTTTCCCCACAAATCCAACCCCACCTACACCAGTCATCACACCTCCTGATACCCCAACCATCATCACAGTTCCTTCAACCAATCCTGTCACAGTTTCCCCCACCAATCCAGCTGCAACCCCAGTGACAGTTCCTTCTACCACACCAGTTCCCTTACCACCTACAAATCCAGCCAATCCAGTTACAGTTCCAGGATCACCACCAGTTACTACCAACCCTATGACTCCTTATCCACCCCCTTCAGGTAGTGTTCTTCAGCCTCCTCCTCCAAACACAAATGCTCAAGCCATGCCGGGTCAGAGTTGGTGTGTTGCAAAGTCTGGAGTTCCAGAAACTACTCTTCAATCAGCATTGGACTATGCTTGTGGAATGGGAAGTGTGGATTGTTCACAAATACAGCAAGGTGGGAGCTGTTACAATCCAAATTCAATGCAAAATCATGCTTCTTTTGCCTTTAACAGCTACTACCAAAAGAATCCAGCTCCAACAAGTTGTGACTTTGGAGGCGCTGCCACCATAGTTAGCACCAATCCGAGCTCGGGTTCTTGCATTTACCCATCATCTTCTGGAGCAGGCACATCCGGCTCTGGTATATCACCTTCAGTTTTAGGGGCCCCAAGCCCTCCAGATTTAGGGGCCTCACATTCAGCTGGTTTGAGACCTTTTCTTGGCTGCATGGTTCTGGTGATATCGTTAGTAACTAGAAGACTCACTGTATAA 1638 0.4151 MAKEASLCLFFLSFLFICCSGILVGFSYRERGDTASSTADGTTFLQKNKISQSQIPFSVLTNANMSVDFFLNRSFVEIFFSSKPSVVSWLKAHLVNILPQADIRSIIISCGSECLGQNEMPLLVSTLKSIHLFLSNLHTSREVKVSVAFPVSIIENLNASYENDLLRTVQFIKKIKSFIIIEDSTNWELSMENHFVQSIIRRATLAASILPCKDVPVVLTIKSQVIHSSMELTQFSKAVSKYLESRSHVTKRIVALYADVHTTKNLAKKKLKEKEEEEIFPLSLGEKLSKVHIRRILQDTNNSPTAVFPTNPTPPTPVITPPDTPTIITVPSTNPVTVSPTNPAATPVTVPSTTPVPLPPTNPANPVTVPGSPPVTTNPMTPYPPPSGSVLQPPPPNTNAQAMPGQSWCVAKSGVPETTLQSALDYACGMGSVDCSQIQQGGSCYNPNSMQNHASFAFNSYYQKNPAPTSCDFGGAATIVSTNPSSGSCIYPSSSGAGTSGSGISPSVLGAPSPPDLGASHSAGLRPFLGCMVLVISLVTRRLTV* 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0633 545 Pfam X8 domain 408 478 IPR012946 -
Apr4g0633 545 Gene3D - 400 497 - -
Apr4g0633 545 Coils Coil 257 277 - -
Apr4g0633 545 Gene3D Glycosidases 24 193 - -
Apr4g0633 545 SMART X8_cls 407 491 IPR012946 -
Apr4g0633 545 PANTHER CARBOHYDRATE-BINDING X8 DOMAIN PROTEIN 136 505 - -
Apr4g0633 545 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 136 505 IPR044965 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g0633 Apr-Chr4 5253962 5256321 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g0633 371 494 Glycoside Hydrolase AT2G05790 46.400 1.25e-28 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0633 - - ccaj:109798054 592.038
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g0633 4 5253962 5256321 Apr8g1315 8 19555953 19558855 PCT