Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0351 ATGCCTTCAACTTGCGCCAAAATCAACACCCCCAACGCTGCCGATGAGTCAGGTGACGCCACCACCATCTCTGCTGTCCATCCCGATGTAATTCAAACACACATCCTCACCCGCCTCGACGGCCCAGCACTCGCCTCTGTTGCCAGCGCGTGCTCTGAGTTCCACGCCCTCTCAGCGCTCGACCATCTCTGGGCTAACATTTGCCATTACACGTGGCCCTCCACCAAGGCGCCACGCGTTAGCCACATCATAGCCACCTTCCCAGGCGCTTCTCACTCTTTTTTTTCTGACTCTTTTCCTGTGGCCCTTGCAGCAGCTCATGGCTCGTGTACCGATGGTGCTGCGCCGGAACTTATCTCTGCTGTGGACCTCTTCCATCGGCAAGAGTTGGTGCTGTCAAGGATGGTGGAGACGGAGACTGAGTCTGGATGGTTCCGGTGCTCGCCCTTCAGGGTGGACCTGTTGGAACCGAAGGAGGCAGTTCCATCGGTGATGAAGTATCCTAGGAGTGAGGAAGCGTGTGACGGTCTTGGAGAGAAACTGACACTGAGTTGGATAGTGATTGATCCGAAAGGAAAACGTGCCATGAACGTATCCAGTGGAAAGCCTGTGTCGGTGCGGCGGCATTGGCTGAGTGGAGAGGTGCAGATGCGGTTTGCATCGCTGATTGACGGTGGAGAGAAAGGGTCAGCAACCGAGGGGGTGCTTTGCAGCATGACAGTGACATGTGGAGGTGAAATGCAAGTGAGGGAAGTGTGTTTGCATATGGAGGATATGGATGGAATGCAATTGAATGGAAGGGATAGTTTGAAAATTTTACAGAGGGCGTTGGAGGGTAAAAGAGGAAAATTGAAGAATGAAAAAGCAGGGAGGCACAGATATGGGGAATTCATAAATCGAAAGGAAGAGAGGAAGGAGAAGAAAGTAAAGGCTGAAAGAAGGTTGGATATGTTTTGCGTGGCCTTCCTGGTGTTGTCGTTTGCGGCTCTTTCCGTTCTCTTTCTCTTCTGA 1011 0.5242 MPSTCAKINTPNAADESGDATTISAVHPDVIQTHILTRLDGPALASVASACSEFHALSALDHLWANICHYTWPSTKAPRVSHIIATFPGASHSFFSDSFPVALAAAHGSCTDGAAPELISAVDLFHRQELVLSRMVETETESGWFRCSPFRVDLLEPKEAVPSVMKYPRSEEACDGLGEKLTLSWIVIDPKGKRAMNVSSGKPVSVRRHWLSGEVQMRFASLIDGGEKGSATEGVLCSMTVTCGGEMQVREVCLHMEDMDGMQLNGRDSLKILQRALEGKRGKLKNEKAGRHRYGEFINRKEERKEKKVKAERRLDMFCVAFLVLSFAALSVLFLF* 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0351 336 Gene3D - 14 102 - -
Apr4g0351 336 PANTHER OS12G0156500 PROTEIN 12 330 - -
Apr4g0351 336 PANTHER F-BOX PROTEIN-RELATED 12 330 IPR045283 -
Apr4g0351 336 SUPERFAMILY F-box domain 28 82 IPR036047 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g0351 Apr-Chr4 2982083 2983093 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0351 - - vra:106757292 414.461
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g0351 4 2982083 2983093 Apr4g0351 4 2982083 2983093 ECH
Apr8g0062 8 543777 546138 Apr4g0351 4 2982083 2983093 PCT