Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0271 ATGGGGGCCTCGCTGTCGAACCTAGGAACCAACGGTTCGACCACCGCTCCGGGCCTTGGCGACATACCGGAGAGTTGCGTCGCTCGCGTTTTCCTGCATCTCACTCCGCCGGAGATATGCAACTTGGCGCGCTTGAATCGAGCGTTTCGCGGCGCCGCCTCTGCCGATTACGTCTGGGAAGCGAAGTTGCCTCGTAACTACCAAGATCTGCTCGATTTAATGCCTCCGGAGAGGTATCAGAATCTCTCCAAGAAGGACATCTTCGCGCTGCTATCTCGGCCAGTTCCGTTTGACGACGGCAACAAGGAAGTGTGGCTGGACAGGGTCACGGGAAGGGTTTGCATGTCCATTTCGGCAAGAGCGATGTCGATTACTGGAATTGATGACCGCAGATACTGGACTTGGGTTCCTACTGAAGAATCTAGGTTCAACACTGTAGCATACTTGCAGCAAATATGGTGGTTTGAAGTGGATGGGGAGGTTAGCTTCCCATTTCCTGCTGATATTTATACTCTCTCCGTTAGGCTTCACCTTGGACGATTTTCCAGAAGGCTTGGTCGGCGTGTATGCAATTATGAACAGACCCATGGTTGGGATATAAAACCAGTGAGATTTGAGTTCTCAACTTTGGATGGTCAGCAAGCATCATTTGAGTGCTGCTTGGATGACACTGAACAAGATGATGCGCACGGCAGCAATCATAAGCGTGGACATTGGGTTGATTACAAGGTGGGTGAGTTTATTGTCAACGGATCAGAACCCTCAACTAAAGTTAGATTCTCCATGAAACAGATCGATTGTACACACTCTAAAGATGAGACGGATAAAGAAACAGGAGAACAAGCTTCGCCAGCACTTTGGTCTGTTATTAATTTTGCCATTTAA 885 0.4915 MGASLSNLGTNGSTTAPGLGDIPESCVARVFLHLTPPEICNLARLNRAFRGAASADYVWEAKLPRNYQDLLDLMPPERYQNLSKKDIFALLSRPVPFDDGNKEVWLDRVTGRVCMSISARAMSITGIDDRRYWTWVPTEESRFNTVAYLQQIWWFEVDGEVSFPFPADIYTLSVRLHLGRFSRRLGRRVCNYEQTHGWDIKPVRFEFSTLDGQQASFECCLDDTEQDDAHGSNHKRGHWVDYKVGEFIVNGSEPSTKVRFSMKQIDCTHSKDETDKETGEQASPALWSVINFAI* 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0271 294 PANTHER F-BOX DOMAIN, PHLOEM PROTEIN 2-LIKE PROTEIN-RELATED 1 272 - -
Apr4g0271 294 PANTHER F-BOX PROTEIN PP2-A15 1 272 - -
Apr4g0271 294 SUPERFAMILY F-box domain 15 87 IPR036047 GO:0005515
Apr4g0271 294 Pfam Phloem protein 2 113 271 IPR025886 -
Apr4g0271 294 ProSiteProfiles F-box domain profile. 16 62 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g0271 Apr-Chr4 2270075 2274650 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0271 - - gmx:100807328 516.538
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g0271 4 2270075 2274650 Apr4g0271 4 2270075 2274650 ECH
Apr4g0271 4 2270075 2274650 Apr8g0573 8 5124481 5129778 PCT