Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g2044 ATGGCTATTTTGGACAGTCACAATGTTCCTGCTTTAGCTTTTGGCTTATTAGGTAACGTCATTTCCTTCCTGGTGTACATGGCACCCCTGCCAACTTTTTACCGAATATGCAAAAGGAAATCGACGGAAGGTTTCCAATCACTGCCTTACCTGGTCGCATTATTCAGTTCCATGCTTTGGCTATACTATGCATTACTCAAGCCAGCTGATTCTACCCTTCTCATTACCATTAACTCATTCGGATGTGTCATTGAGATTATTTACATTGCCATCTACATAATCTATGCAACCAGGGATGCCAGGAGAATAACCGTTAAACTATTTATGGTGATGAACGTCGGGTCTTTCGCCTCGATCTTCCTCATCACCTACTTTGCTATGCAAGGTTCCCTCCGCGTCCAAGTCCTTGGATGGATTTGTGTATCTATTGCAGTAAGTGTGTTTGCAGCACCTCTAAGCATTGTGGCACAGGTTATTAGAACAAAGAGTGTGGAGTTTATGCCCTTTTATTTGTCACTTGCCCTCACGCTGAGTGCCATAACGTGGTTTGCCTATGGTTTCATACTCAAGGACATATGCATTGCTATTCCAAATGTGTTGGGTTTCATAATGGGATTACTTCAGATGCTGCTATACGGCATTTACAAGAATAGTGGAAATAAAAATAAAGCCGTAGTTACAAAAGAGGAGAAAGAACTAGAGCCAATGAGAGACATTGTTGTGGTGAACACGTTGGGAACGTGTGAGGTGTACCCAATTCCAGTTATCGGTGATGTGAATGAACAAGGAAAGGAAGTTGCAGAAGATAAGGAGAAAACGGCGGAAATCAAGGAAAGCCCAGCGTGA 846 0.4267 MAILDSHNVPALAFGLLGNVISFLVYMAPLPTFYRICKRKSTEGFQSLPYLVALFSSMLWLYYALLKPADSTLLITINSFGCVIEIIYIAIYIIYATRDARRITVKLFMVMNVGSFASIFLITYFAMQGSLRVQVLGWICVSIAVSVFAAPLSIVAQVIRTKSVEFMPFYLSLALTLSAITWFAYGFILKDICIAIPNVLGFIMGLLQMLLYGIYKNSGNKNKAVVTKEEKELEPMRDIVVVNTLGTCEVYPIPVIGDVNEQGKEVAEDKEKTAEIKESPA* 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g2044 281 PANTHER RAG1-ACTIVATING PROTEIN 1 17 276 - -
Apr3g2044 281 Pfam Sugar efflux transporter for intercellular exchange 134 218 IPR004316 GO:0016021
Apr3g2044 281 Pfam Sugar efflux transporter for intercellular exchange 14 98 IPR004316 GO:0016021
Apr3g2044 281 Gene3D - 131 229 - -
Apr3g2044 281 Gene3D - 13 101 - -
Apr3g2044 281 PANTHER BIDIRECTIONAL SUGAR TRANSPORTER SWEET 17 276 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g2044 Apr-Chr3 36437042 36438860 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g2044 1 278 Miscellaneous Gene Families AT5G13170 56.786 4.68e-108 313
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g2044 K15382 - gmx:100817002 400.208
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g2044 3 36437042 36438860 Apr3g2044 3 36437042 36438860 ECH
Apr3g2044 3 36437042 36438860 Apr1g1166 1 20169317 20171360 PCT