Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g1166 ATGGCTATCGTAGGCAGTCACAATCCTTTGGCTTTCACTTTTGGCATACTAGGTAACATCATTTCCTTCATGGTGTACTTGGCTCCGCTGCCAACTTTTTACCGAATATACAAAAAGAAATCCACTGAAGGTTTTCAATCACTGCCATATTTGGTGGCATTATTCAGTTCTATGCTTTGGTTATACTATGCATTGCTCAAAATTCAAGAAGCTGTTCTCCTTATCACAATTAACTCATTTGGATGTGTCATAGAGATCATCTACATTGTCACGTACATAGTCTATGCGCACAAGGATGCCAGGAAATTAACCATTAAACTATTTGCGGTGATGAATGTGGGCTCCTTCTTCTTGATCCTCTTCGTCACGCATTTTGCTATAAATGGTTCCTTCCGTGTCAAAGTCCTTGGATGGATTTGTGTCTCCGTTTCAGTGAGTGTCTTTGCAGCACCTCTAAGCATTGTGGCACAAGTGATTAGAACAAAGAGTGTACAGTTTATGCCCTTCAATTTGTCATTTTTCCTCACGTTGAGTGCCATAATGTGGTTTGCATATGGTCTCTTTCTCAAGGACATATGCATTGCTCTGCCGAATGTGGTGGGTTTTCTTCTGGGGCTACTTCAGATGCTTCTATATGCCGTTTACAGGAATAGCGGTATTAAAAAGCAACAGGTTGTTACAGAGGAGAAAGAGCAAGCATTGGAGTCAGTGATAAACATCGTTGTTGTGAACCCGTTGGGATCTTGTGAAGTGTTCCCAATCCCAGTAGATGCGAATGGTGTTGGTGACGTGAATCAACAGTTACAGGGAAAGAAAGGAATAGAAGATGCAAAAGAACAGGAAAAAAGCGTGGAAGCCAACGAATGCAAAGTGTGA 876 0.4155 MAIVGSHNPLAFTFGILGNIISFMVYLAPLPTFYRIYKKKSTEGFQSLPYLVALFSSMLWLYYALLKIQEAVLLITINSFGCVIEIIYIVTYIVYAHKDARKLTIKLFAVMNVGSFFLILFVTHFAINGSFRVKVLGWICVSVSVSVFAAPLSIVAQVIRTKSVQFMPFNLSFFLTLSAIMWFAYGLFLKDICIALPNVVGFLLGLLQMLLYAVYRNSGIKKQQVVTEEKEQALESVINIVVVNPLGSCEVFPIPVDANGVGDVNQQLQGKKGIEDAKEQEKSVEANECKV* 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g1166 291 Pfam Sugar efflux transporter for intercellular exchange 135 217 IPR004316 GO:0016021
Apr1g1166 291 Pfam Sugar efflux transporter for intercellular exchange 13 99 IPR004316 GO:0016021
Apr1g1166 291 PANTHER BIDIRECTIONAL SUGAR TRANSPORTER SWEET 17 273 - -
Apr1g1166 291 PANTHER RAG1-ACTIVATING PROTEIN 1 17 273 - -
Apr1g1166 291 Gene3D - 132 230 - -
Apr1g1166 291 Gene3D - 13 102 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g1166 Apr-Chr1 20169317 20171360 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g1166 1 291 Miscellaneous Gene Families AT5G13170 58.904 3.64e-116 334
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g1166 K15382 - gmx:100817002 386.726
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g2044 3 36437042 36438860 Apr1g1166 1 20169317 20171360 PCT