Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g1964 ATGGAGGAGGTGGAGAGAGTGAAGGCAGAAGCAGTGCAAATAATGGGAGTATTTCAAGTGTTGCCAAGGCTCGTGGTTTTCGATCTCGATTACACTCTTTGGCCTTTCTACTGTGAGTGCCGATCCAAGCGCGACACGCCTTCTTTGTATCCTCATGCCAAAGGTATATTGTGTGCACTCAAACGCGAGGGGGTTGATGTTGCCATTGCTTCTAAATCGCCCACTCCGGACATCGCAACAACGTTTCTTCATAAACTCAGCATCAGCTCAATGTTTGTTGCCCAGGAAATATTCTACAGCTGGACACACAAAACAGATCATTTTCAGAGAATTCATTCAAGGACTGGGGTCCCCTTTAACTCTATGCTCTTCTTTGACGATGATAATAATAACATCCAAGGGGTCTCGAAAATGGGAGTGACAAGCATTTTGGTTCGAAATGGGGTAAATCTTGGAGCATTCAGAGAAGGCCTGGCAAAATTTTCTCAAAACTGGAATGCATCAATGAACAACAAGCAGAAATGCCTCGCATAG 534 0.4476 MEEVERVKAEAVQIMGVFQVLPRLVVFDLDYTLWPFYCECRSKRDTPSLYPHAKGILCALKREGVDVAIASKSPTPDIATTFLHKLSISSMFVAQEIFYSWTHKTDHFQRIHSRTGVPFNSMLFFDDDNNNIQGVSKMGVTSILVRNGVNLGAFREGLAKFSQNWNASMNNKQKCLA* 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g1964 177 TIGRFAM HAD-SF-IIIC: HAD phosphatase, family IIIC 24 138 IPR010033 -
Apr3g1964 177 SFLD C1.5.2: MDP Like 5 168 - -
Apr3g1964 177 SUPERFAMILY HAD-like 23 153 IPR036412 -
Apr3g1964 177 Gene3D - 6 167 IPR023214 -
Apr3g1964 177 PANTHER MAGNESIUM-DEPENDENT PHOSPHATASE-LIKE PROTEIN 1 175 - -
Apr3g1964 177 PANTHER MAGNESIUM-DEPENDENT PHOSPHATASE 1 MDP1 1 175 IPR010036 GO:0016791
Apr3g1964 177 Pfam Acid Phosphatase 21 163 IPR010036 GO:0016791
Apr3g1964 177 SFLD C1.5: HAD, Beta-PGM, Phosphatase Like 5 168 - -
Apr3g1964 177 CDD HAD_MDP-1_like 22 145 IPR035679 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g1964 Apr-Chr3 35642175 35644590 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g1964 K17619 - gmx:100795199 291.582
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g1964 3 35642175 35644590 Apr3g1964 3 35642175 35644590 ECH
Apr3g1964 3 35642175 35644590 Apr1g1259 1 21359064 21360350 PCT