Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g1259 ATGGGGGAGAGAACAGAGAAGGTGAAGGCGGAGGCATTGCAGATAATTGGAGCGTTTGAGGTTCTGCCAAAGCTGGTCGTTTTCGATCTCGATTACACTCTCTGGCCCTTCTACTGCGAGTGTCGATCGAAGCGCGAAATGCCTTCTCTGTATCCCCACGCCAAAGGCATAATGTTAGCGCTCAAAGAAAAAGGTATCGACGTTGCCATCGCTTCTCGATCACCAACCGCTGATATAGCCACCTCTTTCCTCAACAAATTGAACCTCAGCTCAATGTTCGTTGCCCAGGAAATATATTCCAGTTGGACGCACAAAACGGATCATTTTCAGAGAATTCATTCAAGAACTGCTGTGCCCTTCAACTCTATGCTCTTTTACGATGATGAGGATAGGAACATCCAAGCGGTCTCTAAAATGGGAGTAACTAGCATTTTGGTCGGTAATGGGGTTAATCTTGGATCGTTAAGTGAAGGCCTTACCCAATTTTCTCGAAACTGGAATGCATCGCAGAAGAACAAGCAGAAATGGCTTTCTAAGTACTCTAATAAGTCAGATACTTCCAACCATGCTGCATGA 576 0.4549 MGERTEKVKAEALQIIGAFEVLPKLVVFDLDYTLWPFYCECRSKREMPSLYPHAKGIMLALKEKGIDVAIASRSPTADIATSFLNKLNLSSMFVAQEIYSSWTHKTDHFQRIHSRTAVPFNSMLFYDDEDRNIQAVSKMGVTSILVGNGVNLGSLSEGLTQFSRNWNASQKNKQKWLSKYSNKSDTSNHAA* 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g1259 191 SFLD C1.5: HAD, Beta-PGM, Phosphatase Like 5 171 - -
Apr1g1259 191 SUPERFAMILY HAD-like 23 156 IPR036412 -
Apr1g1259 191 SFLD C1.5.2: MDP Like 5 171 - -
Apr1g1259 191 CDD HAD_MDP-1_like 23 146 IPR035679 -
Apr1g1259 191 Pfam Acid Phosphatase 22 164 IPR010036 GO:0016791
Apr1g1259 191 PANTHER MAGNESIUM-DEPENDENT PHOSPHATASE 1 MDP1 3 176 IPR010036 GO:0016791
Apr1g1259 191 TIGRFAM HAD-SF-IIIC: HAD phosphatase, family IIIC 24 139 IPR010033 -
Apr1g1259 191 Gene3D - 6 169 IPR023214 -
Apr1g1259 191 PANTHER MAGNESIUM-DEPENDENT PHOSPHATASE-LIKE PROTEIN 3 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g1259 Apr-Chr1 21359064 21360350 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g1259 K17619 - gmx:100305763 353.984
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g1964 3 35642175 35644590 Apr1g1259 1 21359064 21360350 PCT