Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g1921 ATGAGGTTGGTGAGCATTGTGCTAATAACCATATTCTCCACGTGCTGCATTTGCTTGGCACAAGATTCCCCAAAAGATTACATTGACGCGCACAACAAAGCGCGTGCAGAGGTTGGGGTTGGTCCACTGTCATGGAGCAAGACCCTTGAAAGCTATGCTCAAAACTATGCGAACAAGATGGTGAAGGATTGCAATATGGTGCACTCCGGTGGCCCTTATGGGGAGAACCTTGCGGGGAGTTCCGGCGACATTACGGCTCCAGGTGCAGTCAAATTGTGGGTAGAGGAGAAGGCGAATTATGACCCTAACTCCAACTCCTGTGTTAACAACGGTGAGTGCTTGCATTATACGCAAGTCGTTTGGAACGAGACCTTCGATCTTGGCTGTGGTAAGGCAAAGTGTGACAATGGTTGGACGTATGTCGTTTGCAGTTACGACCCTCCCGGCAATTTTGTTGGCCAAAAACCTTATTAA 474 0.4873 MRLVSIVLITIFSTCCICLAQDSPKDYIDAHNKARAEVGVGPLSWSKTLESYAQNYANKMVKDCNMVHSGGPYGENLAGSSGDITAPGAVKLWVEEKANYDPNSNSCVNNGECLHYTQVVWNETFDLGCGKAKCDNGWTYVVCSYDPPGNFVGQKPY* 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g1921 157 PRINTS Allergen V5/Tpx-1 family signature 43 61 IPR001283 -
Apr3g1921 157 PRINTS Allergen V5/Tpx-1 family signature 89 102 IPR001283 -
Apr3g1921 157 PRINTS Allergen V5/Tpx-1 family signature 113 129 IPR001283 -
Apr3g1921 157 PRINTS Allergen V5/Tpx-1 family signature 140 153 IPR001283 -
Apr3g1921 157 PANTHER PATHOGENESIS-RELATED PROTEIN 1 9 157 - -
Apr3g1921 157 SMART SCP_3 22 153 IPR014044 -
Apr3g1921 157 PANTHER CYSTEINE-RICH SECRETORY PROTEIN-RELATED 9 157 IPR001283 -
Apr3g1921 157 Pfam Cysteine-rich secretory protein family 29 145 IPR014044 -
Apr3g1921 157 CDD CAP_PR-1 24 157 - -
Apr3g1921 157 Gene3D CAP 22 157 IPR035940 -
Apr3g1921 157 ProSitePatterns CRISP family signature 2. 140 151 IPR018244 GO:0005576
Apr3g1921 157 SUPERFAMILY PR-1-like 18 157 IPR035940 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g1921 Apr-Chr3 35236158 35236631 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g1921 K13449 - gmx:100802988 225.328
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g1921 3 35236158 35236631 Apr3g1921 3 35236158 35236631 ECH
Apr3g1921 3 35236158 35236631 Apr1g1303 1 21961758 21962246 PCT