Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g1303 ATGGGGTTAAGCAAGGTTTCATTTTCTTTATTCTATGTGTTGGGGTTAGTCCTAGTGGGTCAACTAGCCTATGCTCAAGACACAAAGGCAGACTACCTGAATGCACACAACGCTGCAAGGTCACAAGTGGGTGTTCCAAATTTGGTTTGGGACGACACAGTTGCTGCTTTTGCAAGTAACTATGCTAACCAACGTAAAGGTGATTGTAAACTGATCCACTCAGGTGATCACCGTTACGGGGAGAACCTTGCAATGAGCACTGGTGACCTAAGTGGCACAGGTGCAGTTAAACTGTGGGTGGATGAGAAAGCCAACTATAACCATGATTCTAACACTTGTGTTGGTGGAGAGTGTAGGCACTACACTCAGGTGGTTTGGAAAAACTCTGTTCGTCTTGGATGTGCCAAAGTAAGATGTAACAATGGAGGCACATTCATTGGTTGCAACTATGATCCCCCTGGCAACTATGTTGGCCAAAAGCCCTACTAA 489 0.454 MGLSKVSFSLFYVLGLVLVGQLAYAQDTKADYLNAHNAARSQVGVPNLVWDDTVAAFASNYANQRKGDCKLIHSGDHRYGENLAMSTGDLSGTGAVKLWVDEKANYNHDSNTCVGGECRHYTQVVWKNSVRLGCAKVRCNNGGTFIGCNYDPPGNYVGQKPY* 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g1303 162 CDD CAP_PR-1 30 162 - -
Apr1g1303 162 PANTHER CYSTEINE-RICH SECRETORY PROTEIN-RELATED 1 162 IPR001283 -
Apr1g1303 162 PANTHER PATHOGENESIS-RELATED PROTEIN 1B-LIKE 1 162 - -
Apr1g1303 162 SMART SCP_3 27 158 IPR014044 -
Apr1g1303 162 ProSitePatterns CRISP family signature 1. 119 129 IPR018244 GO:0005576
Apr1g1303 162 ProSitePatterns CRISP family signature 2. 145 156 IPR018244 GO:0005576
Apr1g1303 162 Gene3D CAP 26 162 IPR035940 -
Apr1g1303 162 Pfam Cysteine-rich secretory protein family 33 150 IPR014044 -
Apr1g1303 162 PRINTS Allergen V5/Tpx-1 family signature 48 66 IPR001283 -
Apr1g1303 162 PRINTS Allergen V5/Tpx-1 family signature 95 108 IPR001283 -
Apr1g1303 162 PRINTS Allergen V5/Tpx-1 family signature 118 134 IPR001283 -
Apr1g1303 162 PRINTS Allergen V5/Tpx-1 family signature 145 158 IPR001283 -
Apr1g1303 162 SUPERFAMILY PR-1-like 25 162 IPR035940 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g1303 Apr-Chr1 21961758 21962246 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g1303 K13449 - gmx:100807250 273.092
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g1303 1 21961758 21962246 Apr1g1303 1 21961758 21962246 ECH
Apr3g1921 3 35236158 35236631 Apr1g1303 1 21961758 21962246 PCT