Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g1477 ATGTCCATAGTGTTGAACAAAAATAACAGCAGCAAAATGGGTACCCCTGTGTTCCATGAATTCAAAAAGCAAGCTTCTTTCTTCCTCAAGGAGAAAATCAAGACTGCTAGATTAGCTCTAACAGATGTCACCCCTGCAGAATTGATGACAGAAGAGGCAACTAGTGGAAATCCATGGGCCCCAGATTCTCCAACACTCAGATCAATTTCAAGGGCTGCTTTTGAGCTAGATGATTATTGGAGGATTGTGGAGATTTTGCATAAAAGGTTGCTTAAATTTGAAAATAAGAATTGGAGGGTCTCTTACAATTCCTTGATTGTGCTTGAGCACTTGTTGACTCATGGACCAGAAAGTGTTGCAGATGAATTTCAGAATGACAAAGATGTTATTAGCCAGATGAAAGGTTTTCAGTACATTGATAACAGCGGGTTCAACTGGGGCCTAACTGTCAGAAAAAAATCAGAAAGGATAATGAAACTACTGGAAGAAGGATCTCTTTTAAAGGAAGAGAGAAACCATGCTCGAAGGTTATCTAGAGGAATTCAAGGCTTTGGAAGTTTCTCCCACAGCTCAACTCCAGCACATGCTTCCATTCTACGTGAGAAATCATTGCCAACAACACTTGGGAGATATGATTCAGACTTAAACAATCATGAAGATCGGGAAAACCAGCCCTTTGGTTCTAACAATGGTGTGGCCATAGTAGCTGCCAAATCTCCTAGCCATCAAGGTGGGATTTCCAAGTCCTTGGAGAGTGTGGAATCCAAGAGAAACCAGGATGATCTTGGTAACAACCAAATGCTTCAGAAAGACGAAACTAGTTCTAAAGAAAACATGGAGCCTAGCAAGGAGGAATTCCATCTATGGAACTTCAATGGGGAGTCCAAACCACTTTTGGATTGTGATGATGAGGATTCCAGGCTTGGGATTGCTAGAACCGAAGATGATCACCCCTTTAATTCAACAGAAATACATGCCTCTTCATCCCTACTTTCTGCCAGAGACGGAATACTACAAGGGTGTTGA 1026 0.4162 MSIVLNKNNSSKMGTPVFHEFKKQASFFLKEKIKTARLALTDVTPAELMTEEATSGNPWAPDSPTLRSISRAAFELDDYWRIVEILHKRLLKFENKNWRVSYNSLIVLEHLLTHGPESVADEFQNDKDVISQMKGFQYIDNSGFNWGLTVRKKSERIMKLLEEGSLLKEERNHARRLSRGIQGFGSFSHSSTPAHASILREKSLPTTLGRYDSDLNNHEDRENQPFGSNNGVAIVAAKSPSHQGGISKSLESVESKRNQDDLGNNQMLQKDETSSKENMEPSKEEFHLWNFNGESKPLLDCDDEDSRLGIARTEDDHPFNSTEIHASSSLLSARDGILQGC* 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g1477 341 ProSiteProfiles ENTH domain profile. 38 171 IPR013809 -
Apr3g1477 341 PANTHER EPSIN-2-LIKE 16 333 - -
Apr3g1477 341 PANTHER EPSIN/ENT-RELATED 16 333 - -
Apr3g1477 341 Pfam ENTH domain 44 165 IPR013809 -
Apr3g1477 341 CDD ENTH 46 162 - -
Apr3g1477 341 Gene3D - 40 187 IPR008942 -
Apr3g1477 341 MobiDBLite consensus disorder prediction 240 282 - -
Apr3g1477 341 SUPERFAMILY ENTH/VHS domain 24 171 IPR008942 -
Apr3g1477 341 SMART enth_2 44 171 IPR013809 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g1477 Apr-Chr3 29387291 29389000 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g1477 K12471 - gmx:100811093 538.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g1477 3 29387291 29389000 Apr3g1477 3 29387291 29389000 ECH
Apr2g2292 2 27928054 27929759 Apr3g1477 3 29387291 29389000 PCT