Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g2292 ATGTCACTCTTTTTGAACAAAAACAACAGCAGCAAAATGGGCACGCCTTTGTTCCATGAATTTAAAAAGCAAGCTTCTTTCTTCCTCAAGGAGAAATTTAAAACTGCTAGATTGGCTCTCACAGATGTTACTCCAGCAGAACTGATGACAGAAGAAGCTACAAATGGAAATCCATGGGCCCCAGATTCCCCAACTCTTAAATCAATTTCAAGGGCTGCTTTTGAGCTTGATGATTATTGGAGGATAGTAGAGATTTTGCACAAAAGATTGCTTAAATTTGACAAGAACAATTGGAGGGCCTCCTACAATTCTCTAATTGTGCTTGAGCACTTGTTGACTCATGGACCAGAAAGTATTGCACAGGAATTTCGGTGTGACAAAGATGTAGTTAGTCAAATGAAATACTTCCAGCATATTGATGACAGTGGGTTCAATTGGGGTCTGACTGTTAGAAAGAAATCAGAATGGATATTGAATCTGCTGGAAGAAGGAACACTTCTTAAGGAAGAAAGAAACCGTTCTCGGATGTTGACCAGAGGAATTCAAGGTTTTGGGAGTTTCAACCGACGATCAACTCAAACACAAGGCATTATTCTGAGGGAAAAATCATTGCCAACCACATTTGGGAGATGTAACTCTGACTTTAACAGCCGTGAAAATCACGATAACTTGTCCTCTAGCTCAAACAATTGTCTGGACACAACAACAGTTAAATCTCGTAGTCTTAGCCATCAAGGTGGAATTTTCAAGTCCCTAGATAGTGTAGATACTGAGAGCTACCTGGATGATCGAGAAAAATATCCAATGCTACAGAAATCTGAAACAAGCTCTAAAGAAAACATGACACCAAGTAAGGAGGAATTCCATCTATGGAACATGAAAGGAGAGTCCAATCAACTTTTAGATGGTATCCAAGACGATGATTCTAGACTTGGGATATTCATGGCAGAAGATGATCACCCCTTTAACTCAACAGAAATGCATCCCACTTCTTCCCTTCTTTCTTCGAGATGA 1014 0.3974 MSLFLNKNNSSKMGTPLFHEFKKQASFFLKEKFKTARLALTDVTPAELMTEEATNGNPWAPDSPTLKSISRAAFELDDYWRIVEILHKRLLKFDKNNWRASYNSLIVLEHLLTHGPESIAQEFRCDKDVVSQMKYFQHIDDSGFNWGLTVRKKSEWILNLLEEGTLLKEERNRSRMLTRGIQGFGSFNRRSTQTQGIILREKSLPTTFGRCNSDFNSRENHDNLSSSSNNCLDTTTVKSRSLSHQGGIFKSLDSVDTESYLDDREKYPMLQKSETSSKENMTPSKEEFHLWNMKGESNQLLDGIQDDDSRLGIFMAEDDHPFNSTEMHPTSSLLSSR* 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g2292 337 SMART enth_2 44 171 IPR013809 -
Apr2g2292 337 Pfam ENTH domain 44 165 IPR013809 -
Apr2g2292 337 SUPERFAMILY ENTH/VHS domain 24 171 IPR008942 -
Apr2g2292 337 CDD ENTH 46 162 - -
Apr2g2292 337 MobiDBLite consensus disorder prediction 317 337 - -
Apr2g2292 337 Gene3D - 40 187 IPR008942 -
Apr2g2292 337 ProSiteProfiles ENTH domain profile. 38 171 IPR013809 -
Apr2g2292 337 PANTHER EPSIN-2-LIKE 16 336 - -
Apr2g2292 337 PANTHER EPSIN/ENT-RELATED 16 336 - -
Apr2g2292 337 MobiDBLite consensus disorder prediction 265 284 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g2292 Apr-Chr2 27928054 27929759 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g2292 K12471 - gmx:100812797 522.702
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g2292 2 27928054 27929759 Apr2g2292 2 27928054 27929759 ECH
Apr2g2292 2 27928054 27929759 Apr3g1477 3 29387291 29389000 PCT