Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g1463 ATGGGAGACAGGGTGGGTAATTCTAAACAAAGCAGTGTTATGAGTGGGAGTGGGAAAAAAACATACAACAAGCTTCTGGTTGAATCACGCCCTAAAGGCATTGCACAGAGAAATTATGACCACCTTGTGTCATTGACCCATGGTGACTTTGGAAGCAGTGCTGTGGGTCGTGTCACCATTTTTTTACTTAAAATTGCGGCTTTAGAGACTGTGAGGAGGTTCTCCAAGAATAAATGTCCGTGCGTATGGCGAGGCCTGCAGGGTCTGCAAATCCTTGTTTACCCACCTTTCAAATGGATTCAGAGGTGGGCACCCTTCAGGGGTCTGGTCAAAAGCATGCAGGTACTATCAAGACCATTACTAGTCCTTTCAATTGCAACAGTCTTTACTGATGATCAACAACAATGTAATGATGAAACCTCAGATTCTGTTACTGATTCTTATGATTCAGAAGTATCTACTGAACTGTCTCCGGTGCAGTCTAATTTGAATACAAGTCATTTTGAGACAGCTCCTAAAGTTTTAGAATGTGAAAACTGGTTGACTCAACTCAATAAAGAGCTTGAAAATCAAGGAATTAGTTTGCCAGAAAGAGTCAATGATGATGAGCTCCGCAGATTTTACACTGCCTCTAATAACGACTTCTCATGCTTCCTTACCTCAATCAAAAAGACAATACACTGGAGGGAGAGTTACAGATTTCTTTCAGTAGAAGAGCTGGAAATGTGGTCAAATATGGTGTTCTGGCACGGATTCGATTTGTTGCACAGACCTTGCCTCATTGTAAGGCTTGGGATAGCCTGTAGCTCTTTGGCGTCTGAAGATAGACTTCAATTTGCTCGGGCAGTCATATCGCAGGTAGAATATGGAGTCTTGCACTTCGTTGATGCAGACAACCCTCAAATTACCGTATTGGTGGATTGTGAAGGATTGACTCCATTGAGAATTCCTATGAAAATGATGAGATCTTGTTCCTCCCTTCTGCAAGATCACTTTCCTAATCGTCTTGGTTGTTTGTTTATCATTCGACTTCCAGCGATTGTTCGTGTTATTGCCCAAACTTTTATTCGGGTTCTAAAGCCAGCTACCAAGAAGAAGCTGAAATTAGAGGGAGAGATGTATCAGAAAGTACTTCGTGACAATCTGCCGACTCTACCATCATATCTAGGAGGAGACTGCACTTGCATGCAATGTTCTAAAATTGGCAAGTGGAATATGCTGCAACCTCATGCAACTGGGACCAGCAGCAGCAGGATTCATAGAGAAGAGGAGCACATCGGTGACAACGAGGGTTCACCATTACTGCATCCATCTAATGAATTAGATGACCACCAAATCAACAACTATGACCAGTTGTTGAGAACTGCTGTCATAAGTATTCTTGTATTTTGGCTTTTCCTAGCTCTTGGTGCTGGAATATACGATCCTGGTAGTCGTCGTTTATCATCGTAA 1452 0.4242 MGDRVGNSKQSSVMSGSGKKTYNKLLVESRPKGIAQRNYDHLVSLTHGDFGSSAVGRVTIFLLKIAALETVRRFSKNKCPCVWRGLQGLQILVYPPFKWIQRWAPFRGLVKSMQVLSRPLLVLSIATVFTDDQQQCNDETSDSVTDSYDSEVSTELSPVQSNLNTSHFETAPKVLECENWLTQLNKELENQGISLPERVNDDELRRFYTASNNDFSCFLTSIKKTIHWRESYRFLSVEELEMWSNMVFWHGFDLLHRPCLIVRLGIACSSLASEDRLQFARAVISQVEYGVLHFVDADNPQITVLVDCEGLTPLRIPMKMMRSCSSLLQDHFPNRLGCLFIIRLPAIVRVIAQTFIRVLKPATKKKLKLEGEMYQKVLRDNLPTLPSYLGGDCTCMQCSKIGKWNMLQPHATGTSSSRIHREEEHIGDNEGSPLLHPSNELDDHQINNYDQLLRTAVISILVFWLFLALGAGIYDPGSRRLSS* 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g1463 483 SUPERFAMILY CRAL/TRIO domain 242 397 IPR036865 -
Apr3g1463 483 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 249 397 IPR001251 -
Apr3g1463 483 SMART sec14_4 241 394 IPR001251 -
Apr3g1463 483 MobiDBLite consensus disorder prediction 412 439 - -
Apr3g1463 483 Pfam CRAL/TRIO domain 245 391 IPR001251 -
Apr3g1463 483 PANTHER SEC14 CYTOSOLIC FACTOR FAMILY PROTEIN / PHOSPHOGLYCERIDE TRANSFER FAMILY PROTEIN 9 479 - -
Apr3g1463 483 CDD SEC14 238 391 IPR001251 -
Apr3g1463 483 MobiDBLite consensus disorder prediction 416 430 - -
Apr3g1463 483 Gene3D - 175 425 IPR036865 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g1463 Apr-Chr3 29251908 29256007 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g1463 - - gmx:100814843 775.393
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g1463 3 29251908 29256007 Apr3g1463 3 29251908 29256007 ECH
Apr2g2282 2 27857571 27862194 Apr3g1463 3 29251908 29256007 PCT