Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g2282 ATGGGAGATTCTTCTGACTTCAGCAGGATCCCTGAACACAAAAATTCACTAATTGCATCTCATCCTATAAGTTTTGCACAAAGAAGCCATGAATATCTCATTTTGCTGATCCGTGGGCACTTTGGAAGAAGTACTGTGGGTCGGATCACATTTTTTTCACTTAAAGTTGCTGCTTTAGAGATCATAAGGCGGTTCTCCAAGAGAAGATGCCCATGTGTATGGCGAGGCCTTCAGGCTCTACAAATCCTATGTTATCCACCTTTTAAATGGATTCAGAGGTGGGCCCCCTTCAAGGGTTTGGTTAAAAGCATGCAGGTCCTATCAAGACCTTTGCTAGCCCTTTCAATTGCAACAGTGCTTACTGATAAATCAGAATATAGGGATGGAACATCAGATTGTAGTAACGATTCACATGATTCAGTAGCATACTTGGAACCATCTCCTTTACAGGTTGATACGAATACAAGTCAGAGTTTGACAGATCCTAAAATTTTAGAACCCGACAATTGGTTGACTCAACTCTATCATGAGCTTGAAAATCAAGGGCTTAGTTTACCAGAAAGAATCAATGATGATGAACTTAGCAGATTTTATGCAGCTTGTAATGATGATTTTTCATCCTTCTTTACCTCAATCAAGAAAACCATAAGATGGCGAGAAACTTACAGAATACTCTCAGAAGAAGAACTGAAAATGTGGTCAAAAATGGTGTTTTGGCATGGGTCTGATGTGAGGGGAAGACCTTGCCTAATTGTAAGGCTTGGGCTAGCATGCAGTATGTCATCTCAAGATAGACCTCGATTTGCCCAGGCAGTTATATCACAGGTGGACTATGGAGTCTTGCACTTGGTTGATGCAGACAACCCTCAAATTACAGTGTTGGTGGATTGTGAAGGGTTATCTCCAGCAAAAATTCCCATGCAAATAATGAGATCTTGTTCTTCCCTTCTGCAAGACAACTTTCCTAATCGCCTTGGTTGTTTGTTTGTCATACGACTGCCAGCAGATGTTCATGCTATTGCCCAGACTTTTATTCAGGTTTTGAAGCCTGCTACGAGGAACAAGTTGAAAATAGAAGGGGAGACGTATCAGAATGATCTTTCTGACCATCTGCTGATACTGCCTTCATATCTTGGAAGTTGCTGCACTTGCATGAAATGCTCTAATATTGGCAAGTGGGATATGCTTCAACCTTATTCAACTGGGACAAGCAGGGGAGATGGGGAAGTGGGTATAATAAGTGACAGTGACACCGAGGATTCTCCAACATTGCATCCACCCAATGAATTAGAAGGCCGCTTATATAATAATTATGATCAGCTGTTGAGAACTGCTATCATAGGTATTCTCGTTTTCTGGGTTTTGATAGCTCTTGGTGCTGTAGTATTTGATCCCGCTAATCATTAG 1407 0.4129 MGDSSDFSRIPEHKNSLIASHPISFAQRSHEYLILLIRGHFGRSTVGRITFFSLKVAALEIIRRFSKRRCPCVWRGLQALQILCYPPFKWIQRWAPFKGLVKSMQVLSRPLLALSIATVLTDKSEYRDGTSDCSNDSHDSVAYLEPSPLQVDTNTSQSLTDPKILEPDNWLTQLYHELENQGLSLPERINDDELSRFYAACNDDFSSFFTSIKKTIRWRETYRILSEEELKMWSKMVFWHGSDVRGRPCLIVRLGLACSMSSQDRPRFAQAVISQVDYGVLHLVDADNPQITVLVDCEGLSPAKIPMQIMRSCSSLLQDNFPNRLGCLFVIRLPADVHAIAQTFIQVLKPATRNKLKIEGETYQNDLSDHLLILPSYLGSCCTCMKCSNIGKWDMLQPYSTGTSRGDGEVGIISDSDTEDSPTLHPPNELEGRLYNNYDQLLRTAIIGILVFWVLIALGAVVFDPANH* 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g2282 468 PANTHER SEC14 CYTOSOLIC FACTOR FAMILY PROTEIN / PHOSPHOGLYCERIDE TRANSFER FAMILY PROTEIN 11 467 - -
Apr2g2282 468 SMART sec14_4 231 383 IPR001251 -
Apr2g2282 468 Gene3D - 166 401 IPR036865 -
Apr2g2282 468 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 227 386 IPR001251 -
Apr2g2282 468 Pfam CRAL/TRIO domain 234 370 IPR001251 -
Apr2g2282 468 SUPERFAMILY CRAL/TRIO domain 235 385 IPR036865 -
Apr2g2282 468 MobiDBLite consensus disorder prediction 402 427 - -
Apr2g2282 468 CDD SEC14 227 379 IPR001251 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g2282 Apr-Chr2 27857571 27862194 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g2282 - - gmx:100786215 706.827
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g2282 2 27857571 27862194 Apr2g2282 2 27857571 27862194 ECH
Apr2g2282 2 27857571 27862194 Apr3g1463 3 29251908 29256007 PCT