Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g1402 ATGCAGACCCCAAAGACAAGAAGTGGCTCCTCTGAAGTACCTCAGAAGGTGTCTCCACGTGCTGTGCGCCAACTCAAGACTGCTTCTCTAGACAATGACTCTGTATCTTCTGTAAGTCAAGCTACTAAATTATCAAAGGAAAGGAGCCCCAAAGTCAGTGACCGTAGATCACCCAGAAGCCCAGTTCCTGAGAGGAAGCGCCCCAGCCGAATATCTGAATTGGAATCTCAAATTTCTCAACTCCAAGATGATTTGAAGGTGGTGAGGGACCAGCTCATTTTGTCTGAATCATGCAAGAAACAAGGTCAAAAAGATGCTGAGGAGTCCAAGGAGCAACTATTAGCATTATCTGCTAAACTTGAAGATTCACAAAAACAAGTTATGGAGCTGTGTGCTGCTGGGGAAGCTCGTATTCTTGAACTCCAGAAAATTATAGAAGAACGTGACATGGCATGCCAATCTGAACTTGAGGTCTCCAAAAAGCAACTCTCAGTTGACTCTCATGCCTTGGCCTCTGCAATGAATGAAGTTCAGCTGTTCAAGACCCAACTTGAATTGGTAGCTAATCATGAGTGTGTACAAACTCAACATGCAGAATCAACAGATATGGAGCTACTAACCCTGAAGCAAAATTTGTCAGAAGCGCTCTCTCTTGTGGACAGCATGAAAAATAAATTAAGGGACTGCAAAGAATCTGAAGCTCAGGCCCAAGCATTGGTCAATGCAACTATGTTGCAACTTGAGGCTGCAAAAGGAACTGTTGAGTTCCTAAGGGCTGATGTTGCAAAAGCTGTTGATGGCTACAATTCCATTGCTTTAGAGTTGGAGCAGTCTAAAGCAAAGGTGAACTCTCTAGAGGCACTTGTTAGGAAACTTGAGAAAGACCCTATCAATAATAAATGCAACCATTCTGAAAATCTTGCAGATGATCAAAGATTTGAGCACCAAGATGAAATATTGAAAGAGGGAGAGCATCCTAATTACATGGAAGCAGAAATTATATCTTTGAAATCTGAGGTTGGAAGACTGAAATCTGCTATAGACACTGCTGAGTCTAAATACCAAGAAGAACAGATTAGGAGCACGGTGCAGATCAGAAATGCTTATGAACTTGTGGAGCAGATAAAATATGAATCAGGTGAGAGGGAATGTGAATTAGAGGCTGAGTTGAACAGAAACAAAGCTGATATTGAAGAGTTGAAGGCTAACTTAATGGACAAGGAAACTGAGTTACAAGGTATTGTGGAGGAGAATGAGAACTTGAGTTTAAAACTTGAAAAGAGTATGTTATCCCAAAATGAGCATGAACTCAGAAAGGAAATTAAAAGATTAGAAGAACATGTGGCTGAGTTGAAGGCGGATATGATGGACAAAGAGACAACACTGCAAAGCATATCTGAAGAGAATGAAATGCTGAAGTTGGAAATCAACAAGAGGTTCTCAGATGGTGGGAAAGTGAGAGAGGAAGTTGCTGCTGAAGTAGAGGGTGCGAAGGCTGCGAAACGTGAAGCTATCATGAAACTTGGCATTGTGTTGGAGGAAGCAGATAGAAGCAACAAGAAGGCTGCAAGAGTGGTTGAGCAACTAGAAGCAGCACAAGGAGCAAACTTAGAAATGGAAGCAGAATTGAGAAGACTCAAGGTACAATCAGATCAATGGAGAAAGGCTGCAGAAGCAGCAGCTGCTATGCTTTCAGCAGGAAACAGTGGGAAACTCACAGAGAGAACTGTGTCTTTGGACAACAACTATAAGTGTTCACCCTATGCTGATGACATGATGGACGATGAGTTCCAGAGAAAGAAAAATGGTAACATGCTGAAGAAGATTGGAGTCTTGTGGAAAAAACCTCAAAAACAGTGA 1860 0.4199 MQTPKTRSGSSEVPQKVSPRAVRQLKTASLDNDSVSSVSQATKLSKERSPKVSDRRSPRSPVPERKRPSRISELESQISQLQDDLKVVRDQLILSESCKKQGQKDAEESKEQLLALSAKLEDSQKQVMELCAAGEARILELQKIIEERDMACQSELEVSKKQLSVDSHALASAMNEVQLFKTQLELVANHECVQTQHAESTDMELLTLKQNLSEALSLVDSMKNKLRDCKESEAQAQALVNATMLQLEAAKGTVEFLRADVAKAVDGYNSIALELEQSKAKVNSLEALVRKLEKDPINNKCNHSENLADDQRFEHQDEILKEGEHPNYMEAEIISLKSEVGRLKSAIDTAESKYQEEQIRSTVQIRNAYELVEQIKYESGERECELEAELNRNKADIEELKANLMDKETELQGIVEENENLSLKLEKSMLSQNEHELRKEIKRLEEHVAELKADMMDKETTLQSISEENEMLKLEINKRFSDGGKVREEVAAEVEGAKAAKREAIMKLGIVLEEADRSNKKAARVVEQLEAAQGANLEMEAELRRLKVQSDQWRKAAEAAAAMLSAGNSGKLTERTVSLDNNYKCSPYADDMMDDEFQRKKNGNMLKKIGVLWKKPQKQ* 620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g1402 619 PANTHER INTERACTOR OF CONSTITUTIVE ACTIVE ROPS 3 1 618 - -
Apr3g1402 619 Coils Coil 205 242 - -
Apr3g1402 619 Coils Coil 103 126 - -
Apr3g1402 619 Coils Coil 333 360 - -
Apr3g1402 619 Coils Coil 512 556 - -
Apr3g1402 619 Coils Coil 427 475 - -
Apr3g1402 619 Coils Coil 71 91 - -
Apr3g1402 619 MobiDBLite consensus disorder prediction 47 71 - -
Apr3g1402 619 MobiDBLite consensus disorder prediction 1 17 - -
Apr3g1402 619 MobiDBLite consensus disorder prediction 25 46 - -
Apr3g1402 619 Coils Coil 268 295 - -
Apr3g1402 619 Coils Coil 387 424 - -
Apr3g1402 619 MobiDBLite consensus disorder prediction 1 71 - -
Apr3g1402 619 PANTHER INTERACTOR OF CONSTITUTIVE ACTIVE ROPS 2, CHLOROPLASTIC-RELATED 1 618 IPR029688 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g1402 Apr-Chr3 28480128 28484734 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g1402 - - gmx:100798862 938.717
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g1402 3 28480128 28484734 Apr3g1402 3 28480128 28484734 ECH
Apr2g2232 2 27422216 27426305 Apr3g1402 3 28480128 28484734 PCT