Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g2232 ATGCAGACCCCAAAGACAAGAACTAGCTCCTCTGAGGTGCCTCAGAAGGTTCCTCCTCGTGCAGGACGCCAACCCAGGCCTTCTACACTAGACACCGATTCTGCATCTTCCTTAAACCAAGCTAATAAAACACCAAAGGATAGAAGTCCCAAAGTCGCTGAGCGTAGATCACCCAGAAGCCCAGCTCCGGAGAGGAAACGCCCTAGCAGAATATCTGAGTTGGAATCTCAACTTTCTCAGCTTAAAGAGGATTTGAAGGTGGTGAGGAACCAACTCAGTTTATCTGAATCATGCAAGAAGCAAGCTCAGCAAGATGCTGAAGAGTCCAAGGAGCAACTAGTTGCCTTGTCTGTGAAACTTGAAGATTCTCAAGAGCAACTTCTGAAGCTCTCTTCCACTGAAGAAGCGCGTGTTATTGAGCTCCAGAAAACCATAGAAGATCACGATAAGGCATGGCAATCCGAGCTGGAGGCTGCCCGAAAGAAGCTGTCAGAAAACTCTGCTGCATTAACCTCTGCCATCAATGAAATTCAGCAGCTCAAGGTTCAACTTGAACTAGTAGCTAATTGTGAGAATGCACACACCCAAATTGCTGAATCATCAGACGTGGAACTTCAAAACCTTAAGCATAACTTAGCAGAATCTCTCTCTCTTGTGGAGAACATGAAAACACAGCTAAGGGATTGCAAGGAATCAGCTCAGGCTCAAGCTTTGGTGAATGAGACTTTGAGACAACTTGAGGCTGCAAAAAGAACTGTTGAATTCCTAAGGGCTGATGCTGCAAAAGCTGTGCATGGATACAACTCTACTGCTTTAGAATTAGACCAATCTAGAGCAAGGGTGAACTCACTAGAAGCACTTGTAAGCAAACTAGAGTTACCCCTTATCAATAACAAATACAACCTTTCTTCAAATCTTGCAGATGATGGTAAAATGGAGCAGAAAGCTGAAAGACTAGAAAAGGGTGAGGATCATAATCACATTGAAGCAGAAATTTATTCTTTGAAGTCTGTCATAGAGACTGCTGACACTAAATACCAGGAAGAACAAATTCAAAGCTCAGTGGAGATCAGGAATGCCAATGAGTTGATAGAAAAGATAAAATCAGATTCAAGTCAAAGAGAACTTGATTTAGAGGCTGAATTGGAAAGAAAGAAAGCTGAAATTGAAGACTTGAAAGCGAACCTAATGGATAAGGAAACCGAGTTGCAAGGCATTGTGGAGGAGAATGAGAAGTTGAACTTGCAGCTTCAAAACAGCATGTCATCCCAAAGAGAACTTGAACTTAAAAGGCAACTTCAAAGACTAGATGAATATGTGGCTCAATTGAAGGCTGATCTGATGGACAAAGAGACAACATTGCAAAGCATATCCGAAGAGAATGAAATGCTGAAGTTGGAAATCAGCAAGAGGTTTGCACATGGTGGTAAAGTGAGTGAGGAAATGGATGCAGAACTAGAGGCAGCTAAGGCTGCAGAACGTGAAGCTGTAATGAAACTTGGGATTGTGATGGAGGATGCAGATAGGTGCAACAAGAAGGCAACGAGGGTGGCGGAACAGCTTGAAGAAGCACAAGCAGCAAATTCAGAAATAGAAGCTGAATTGAGAAAATTGAAGGTTCAGTCTGATCAGTGGAGGAAGGCTGCAGAAGCTGCTGCTGCTATGCTTTCAGCTGGGAACAATGGGAAACTCACTGAGAGGTCTATGTCTTTGGACAACAACTATAACTCTCTGATGGATAAGTACTCACCCTTCTGTGAAGAACTTGATGATGATTTCCAGAGAAAGAAAAATGGCAACATGCTCAAGAAGATTGGGGTCTTGTGGAAGAAACCTCAAAAATAG 1845 0.4293 MQTPKTRTSSSEVPQKVPPRAGRQPRPSTLDTDSASSLNQANKTPKDRSPKVAERRSPRSPAPERKRPSRISELESQLSQLKEDLKVVRNQLSLSESCKKQAQQDAEESKEQLVALSVKLEDSQEQLLKLSSTEEARVIELQKTIEDHDKAWQSELEAARKKLSENSAALTSAINEIQQLKVQLELVANCENAHTQIAESSDVELQNLKHNLAESLSLVENMKTQLRDCKESAQAQALVNETLRQLEAAKRTVEFLRADAAKAVHGYNSTALELDQSRARVNSLEALVSKLELPLINNKYNLSSNLADDGKMEQKAERLEKGEDHNHIEAEIYSLKSVIETADTKYQEEQIQSSVEIRNANELIEKIKSDSSQRELDLEAELERKKAEIEDLKANLMDKETELQGIVEENEKLNLQLQNSMSSQRELELKRQLQRLDEYVAQLKADLMDKETTLQSISEENEMLKLEISKRFAHGGKVSEEMDAELEAAKAAEREAVMKLGIVMEDADRCNKKATRVAEQLEEAQAANSEIEAELRKLKVQSDQWRKAAEAAAAMLSAGNNGKLTERSMSLDNNYNSLMDKYSPFCEELDDDFQRKKNGNMLKKIGVLWKKPQK* 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g2232 614 PANTHER INTERACTOR OF CONSTITUTIVE ACTIVE ROPS 3 1 614 - -
Apr2g2232 614 MobiDBLite consensus disorder prediction 1 15 - -
Apr2g2232 614 MobiDBLite consensus disorder prediction 47 78 - -
Apr2g2232 614 Coils Coil 504 548 - -
Apr2g2232 614 PANTHER INTERACTOR OF CONSTITUTIVE ACTIVE ROPS 2, CHLOROPLASTIC-RELATED 1 614 IPR029688 -
Apr2g2232 614 Coils Coil 71 91 - -
Apr2g2232 614 Coils Coil 375 416 - -
Apr2g2232 614 MobiDBLite consensus disorder prediction 1 78 - -
Apr2g2232 614 Coils Coil 99 126 - -
Apr2g2232 614 Coils Coil 160 180 - -
Apr2g2232 614 MobiDBLite consensus disorder prediction 27 46 - -
Apr2g2232 614 Coils Coil 205 225 - -
Apr2g2232 614 Coils Coil 426 467 - -
Apr2g2232 614 Coils Coil 232 259 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g2232 Apr-Chr2 27422216 27426305 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g2232 - - gmx:100798050 897.116
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g2232 2 27422216 27426305 Apr2g2232 2 27422216 27426305 ECH
Apr2g2232 2 27422216 27426305 Apr3g1402 3 28480128 28484734 PCT