Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g1327 ATGGGCGCGAAAAAGAAGACCGCTGGCGGAAACAACAATAAGGAGAACCAAGACACTAACTCCACCTTCGTCTTGAAGCTCGACATGCATTGCGACGGTTGCGCTTCCAAAATCATTCGACACCTTCGCGCTTTCCAAGGTGTGGAGACGGTGAAGGCGGAGAGCGACGCCGGGAAGGTAACGGTGACCGGAAAAGTGGACCCCGCGAAAGTGAGGGACAACCTGGCGGAGAAGCTAAATAAGAAGGTTGAACTCATCACTTCACAGCCCAAGAAGAAGGAGAACAAAGACACCAAACCCAACAACCAATCCCACAACAAAATAATCAAAGACAAAGAGGTTGAGACTACAGCGGTTCTGAAGATGGCACTGCATTGCCAGGGATGTCTAGACAGGATTGGCAAGACTGTGTTGAAAACCAAAGGAGTTAAAGAAATGGCTATAGACAAGGAAAAAGAAACGGTGACTGTGAAGGGTACAATGAACGTGGAAGCTCTTGTGGGGAATCTGATGGAGAAGCTTAAAAGGAAGGTTGAGGTGGACCCTCCCAAGAAAGACAAGGACAGTGATAACAAGGAAGGAGGCAAGAAGAAGAACAAAGGTGGTGGTGGTGGAGATAAGAATGAGAATGAAGAGGGAGGAGAGAAAATGGAGCAAAACAGAATGGAGCATTTGCCACCACCTCCCTCTGGCTTTGGTTATGGTTATGGTTATGGCAATTTTGGCGGCCTTAACTATGTACCTGTCTACCCGGAGCAGATGCATTTTCACTTGCATGCACCACCACCACAAATGTTCAGTGATGAGAACCCAAATGCTTGTTCTGTCATGTGA 834 0.4772 MGAKKKTAGGNNNKENQDTNSTFVLKLDMHCDGCASKIIRHLRAFQGVETVKAESDAGKVTVTGKVDPAKVRDNLAEKLNKKVELITSQPKKKENKDTKPNNQSHNKIIKDKEVETTAVLKMALHCQGCLDRIGKTVLKTKGVKEMAIDKEKETVTVKGTMNVEALVGNLMEKLKRKVEVDPPKKDKDSDNKEGGKKKNKGGGGGDKNENEEGGEKMEQNRMEHLPPPPSGFGYGYGYGNFGGLNYVPVYPEQMHFHLHAPPPQMFSDENPNACSVM* 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g1327 277 SUPERFAMILY HMA, heavy metal-associated domain 22 84 IPR036163 GO:0046872
Apr3g1327 277 CDD HMA 29 84 IPR006121 GO:0046872
Apr3g1327 277 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 6 5 277 IPR044594 GO:0046872
Apr3g1327 277 Gene3D - 18 94 - -
Apr3g1327 277 Gene3D - 112 186 - -
Apr3g1327 277 MobiDBLite consensus disorder prediction 85 110 - -
Apr3g1327 277 MobiDBLite consensus disorder prediction 176 228 - -
Apr3g1327 277 ProSiteProfiles Heavy-metal-associated domain profile. 29 77 IPR006121 GO:0046872
Apr3g1327 277 MobiDBLite consensus disorder prediction 176 222 - -
Apr3g1327 277 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 3 5 277 - -
Apr3g1327 277 SUPERFAMILY HMA, heavy metal-associated domain 116 172 IPR036163 GO:0046872
Apr3g1327 277 Pfam Heavy-metal-associated domain 27 84 IPR006121 GO:0046872
Apr3g1327 277 Pfam Heavy-metal-associated domain 123 179 IPR006121 GO:0046872
Apr3g1327 277 CDD HMA 124 179 IPR006121 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g1327 Apr-Chr3 27720667 27722469 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g1327 - - pvu:PHAVU_011G084200g 344.354
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g1327 3 27720667 27722469 Apr3g1327 3 27720667 27722469 ECH
Apr2g2173 2 26857379 26858444 Apr3g1327 3 27720667 27722469 PCT