Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g2173 ATGCATTGCGACGGATGCGCTTCCAAAATCGTCCGTTGCATTCGCGGTTTCGAAGGCGTGGAGAGTTTGAAGGCGGAGAGCGAGACCGGCATGTTGACCATCACCGGAAAACTCGACCCTTCCAAACTCAGGGACAAGCTCACCAGCAAGATGAAGAAGAAGGTTAACCTTATCTCTCCCGTTCCAAACAACAAGGAAAAAGATAACAAATCCAAAAACAACAGTAAACCCAAAGACCCTCCTGTGACGACGACGGTTCTCAAGGTGTCGTTGCATTGCCAGGGTTGCATTGAGAGGATTCGCAAGACTGTGTTGAAGACCAAAGGTGTGCGTGACATGGCTATAGATAAAGAGAAGGAGACGGTGACGGTGAAAGGCACGATGGACGTGAAAGCTTTGGTGGCGAATTTGACTGAGAGGCTTAGGAGGAAGGTTGAGGTGGTCCCTCCCAAGAAGGAGAAGGAGAAGGAGAAGGAGAAGGAGAGTGTGAAAGAGAGTGCTGCCCCTGACAAAGGAGGGAATGCTGGTGCAAAGAAGAAGAAGAAGGGTGGTGGAGATAATGACAAGGACGAAGAGGGCGGTGGTGATGGCCAGGGGAAAATGGAACAGAGTAAGGTGGAGGGTTCGGCACCTGCATATGGATATGGTTTTGGTTATGGTTATGGGTATGGGGGCGGTGATGTCTATAATTATGGGCCAGTCTACATGGGGCAATTGCATGCACCGCAGATGTTTAGTGATGAAAATCCCAATGCTTGTTCCCTTATGTGA 771 0.4968 MHCDGCASKIVRCIRGFEGVESLKAESETGMLTITGKLDPSKLRDKLTSKMKKKVNLISPVPNNKEKDNKSKNNSKPKDPPVTTTVLKVSLHCQGCIERIRKTVLKTKGVRDMAIDKEKETVTVKGTMDVKALVANLTERLRRKVEVVPPKKEKEKEKEKESVKESAAPDKGGNAGAKKKKKGGGDNDKDEEGGGDGQGKMEQSKVEGSAPAYGYGFGYGYGYGGGDVYNYGPVYMGQLHAPQMFSDENPNACSLM* 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g2173 256 SUPERFAMILY HMA, heavy metal-associated domain 1 49 IPR036163 GO:0046872
Apr2g2173 256 MobiDBLite consensus disorder prediction 52 83 - -
Apr2g2173 256 Pfam Heavy-metal-associated domain 87 145 IPR006121 GO:0046872
Apr2g2173 256 Pfam Heavy-metal-associated domain 1 50 IPR006121 GO:0046872
Apr2g2173 256 MobiDBLite consensus disorder prediction 148 167 - -
Apr2g2173 256 SUPERFAMILY HMA, heavy metal-associated domain 81 138 IPR036163 GO:0046872
Apr2g2173 256 ProSiteProfiles Heavy-metal-associated domain profile. 1 47 IPR006121 GO:0046872
Apr2g2173 256 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 3 1 256 - -
Apr2g2173 256 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 6 1 256 IPR044594 GO:0046872
Apr2g2173 256 MobiDBLite consensus disorder prediction 148 207 - -
Apr2g2173 256 Gene3D - 82 155 - -
Apr2g2173 256 Gene3D - 1 65 - -
Apr2g2173 256 MobiDBLite consensus disorder prediction 174 198 - -
Apr2g2173 256 CDD HMA 86 126 IPR006121 GO:0046872
Apr2g2173 256 CDD HMA 1 55 IPR006121 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g2173 Apr-Chr2 26857379 26858444 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g2173 - - aprc:113856391 374.015
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g2173 2 26857379 26858444 Apr3g1327 3 27720667 27722469 PCT