Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g1322 ATGGCATCATCACCAATCCTCTCCAAACTCTCTCTGTCTCTTGTGTTATTCTTCTTCGTGTTACTTTCACCCTCTTATGCAACTTCTCGTTTGACCCATCACCATCTCTTGTCCACAACAACTTCACCACACCAATCACGCGCAGAAAGGCTCATAAAGGGCCTTAACCTATTCCCTAAAGACCCAGTTAACATAAGGAAGGGTGATGTTGCTGCCTTTAGCCCTGGAAAGATTGTGGAGACAAAATTTTCGTTTCTTGGTGATTCTGGGCCTTCTGTTGACGACCTTGGCCACCACGCAGGTTACTATTCGCTTCCTCATTCCAACGCTGCAAGGATGTTCTACTTTTTCTTTGAATCACGGAACAATAAGGACGATCCAGTGGTCATATGGTTGACTGGTGGACCAGGGTGTGGCAGTGAATTAGCTTTGTTTTATGAGAATGGCCCTTTTCATATCACCAATAATTTGTCTCTTGTTTGGAATGACTATGGCTGGGATCAGGCATCAAGTATTTTGTTTGTTGACCAACCTACCGGGACAGGTTTTAGTTATTCTTCTGATGATGCTGACATTCGTCATGATGAAGAGGGTGTTAGCAATGATTTATATGATTTCTTGCAGGAGTTTTTCAAGGCACATCCTGAGTTCGTTAAGAATGACTTTTATATTACTGGAGAATCATACGCTGGACACTATATTCCAGCTCTTGCATCACGGGTTAGCAAAGGAAACAAAGAAAACCAAGGAATTCATATAAACCTCAAGGGCTTTGCTATTGGTAATGGATTAACAAATCCTGGGATTCAGTACAAGGCATACCCAGACTATGCATTAGACAATAAATTAATTACCAAGGATGATTATGATAAAATCTCCAAGTTGATCCCGGACTGTGAGCAAGCCTCAAAAACTTGTGACACTCAAAGTGGACAAAGTTGCGCAACTGCATTAAATATTTGTGAAGAAATATTTAATGATATCTTGACCATTGCTGAAGGCATTAACTACTACGACATCAGAAAGAAATGTGTGGGAAGTTTGTGCTATGATTTCTCAAACGTGGAGAAGTTTCTAAATGAGGAGGAAGTGAAGAGTGCTTTAGGTGTGGGGGATGTGAAATATGTTTCATGCAGTAGAACAGTTTATGATGCTATGGGGGAAGATTGGATGAGAAACTTGGAAGTGGGTATTCCTGATCTTCTTGAGGATGGAATCAAATTGCTTGTATATGCAGGAGAAGAAGATCTCATATGCAATTGGCTTGGGAATTCAAGGTGGGTTCAAGCTATGGAATGGTCAGGCCAAAAGGCTTTTGGGGCATCTCCTACAGTGAAATTTGTGGTTGATGGAGCTGAAGCAGGCGCTTTGAATAGCTATGGACCGCTTTCTTTCCTCAAGGTACATGGTGCTGGGCACATGGTCCCAATGGATCAACCAAAAGCTGCACTTCAGATGTTAAAAAGCTGGATGGAAGGAAAACTGGGGGAAGCAGATAATGTTCCTCATAATTGA 1515 0.4178 MASSPILSKLSLSLVLFFFVLLSPSYATSRLTHHHLLSTTTSPHQSRAERLIKGLNLFPKDPVNIRKGDVAAFSPGKIVETKFSFLGDSGPSVDDLGHHAGYYSLPHSNAARMFYFFFESRNNKDDPVVIWLTGGPGCGSELALFYENGPFHITNNLSLVWNDYGWDQASSILFVDQPTGTGFSYSSDDADIRHDEEGVSNDLYDFLQEFFKAHPEFVKNDFYITGESYAGHYIPALASRVSKGNKENQGIHINLKGFAIGNGLTNPGIQYKAYPDYALDNKLITKDDYDKISKLIPDCEQASKTCDTQSGQSCATALNICEEIFNDILTIAEGINYYDIRKKCVGSLCYDFSNVEKFLNEEEVKSALGVGDVKYVSCSRTVYDAMGEDWMRNLEVGIPDLLEDGIKLLVYAGEEDLICNWLGNSRWVQAMEWSGQKAFGASPTVKFVVDGAEAGALNSYGPLSFLKVHGAGHMVPMDQPKAALQMLKSWMEGKLGEADNVPHN* 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g1322 504 ProSitePatterns Serine carboxypeptidases, histidine active site. 463 480 IPR033124 GO:0004185
Apr3g1322 504 SUPERFAMILY alpha/beta-Hydrolases 96 494 IPR029058 -
Apr3g1322 504 Pfam Serine carboxypeptidase 96 493 IPR001563 GO:0004185|GO:0006508
Apr3g1322 504 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 40 495 IPR001563 GO:0004185|GO:0006508
Apr3g1322 504 PRINTS Carboxypeptidase C serine protease (S10) family signature 162 174 IPR001563 GO:0004185|GO:0006508
Apr3g1322 504 PRINTS Carboxypeptidase C serine protease (S10) family signature 175 185 IPR001563 GO:0004185|GO:0006508
Apr3g1322 504 PRINTS Carboxypeptidase C serine protease (S10) family signature 210 235 IPR001563 GO:0004185|GO:0006508
Apr3g1322 504 PRINTS Carboxypeptidase C serine protease (S10) family signature 463 476 IPR001563 GO:0004185|GO:0006508
Apr3g1322 504 ProSitePatterns Serine carboxypeptidases, serine active site. 224 231 IPR018202 GO:0004185
Apr3g1322 504 Gene3D alpha/beta hydrolase 80 500 IPR029058 -
Apr3g1322 504 PANTHER SERINE CARBOXYPEPTIDASE-LIKE 48-RELATED 40 495 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g1322 Apr-Chr3 27661937 27672450 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g1322 K16298 - gmx:100798795 805.823
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g1322 3 27661937 27672450 Apr3g1322 3 27661937 27672450 ECH
Apr3g1322 3 27661937 27672450 Apr2g2168 2 26817054 26820379 PCT