Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g2168 ATGGCATCATCGTCAAGGTTCCTCAAAATGTGTCTGTTTTCTACGTTGCTCTTCCTCATCTTCATTTCACCTTCTTTCTCATCTCCTTATTATCCCACAAGCAATGACCTTCGCTTTTCTTCAACAGCATCTCTCCCAAAACTAATGGCAGAAAAACTCATTAGAGGGCTTAACCTCTTCCCAAAAGATTCCATTAACACACTTGTGAATGACCCTCATGATGTCACAGGAACCATTGTGGAGAAGAGGTTCACTTTTCCTAGTCTTGCTGCGTCAGCACCTTCTGTTGAAGATCTTGGTCACCATGCAGGCTATTATCGCCTTCCTCGTTCCAAAGCTGCAAGGATGTTCTACTTTTTCTTTGAATCTCGGAACAGTAAGGATGACCCCGTTGTCATATGGTTGACGGGAGGACCAGGATGCAGCAGTGAACTAGCTTTGTTCTACGAAAATGGTCCCTTTCAGTTTACCAAGAACTTGTCTCTTGTGTGGAACGACTATGGCTGGGATAATGCATCAAATATTTTATTTGTAGACCAACCCACGGGGACGGGTTTCAGCTACACTTCTGATGACAGTGACATTCGACATGATGAAGAGGGTGTTAGCAATGACTTGTATGACTTCTTGCAGGCATTTTTCAAGGAGCACCCTCAGTTCACTAAGAATGACTTTTATATTACTGGGGAGTCATATGCTGGACACTATATTCCAGCTCTTGCATCCAGGGTTCACCAAGGAAACAAAGCAAAAGAAGGAATTCATATAAATCTAAAGGGTTTTGCAATTGGTAATGGGTTAACCAATCCTGAAATCCAGTACCAGGCGTATACAGACTATGCATTAGACAGGGGACTGATTAAAAAGGCTGATTATGACAGAATCAAGAAGTTGATCCCACCATGTGAACAGGCCATAAAAACTTGCAGCACTGAAGGTGGAGACACATGCACATCCTCGTTATATGTTTGCGATGACATATTCAATCAGATCTTGTCCGTTGCCGGCAACATTAATTATTATGACATTAGAAAACAATGTGAGGGAAGTCTGTGTTATGACTTCTCCAACGTGGAGACATTCTTAAACAAGAAGAATGTGAGGGAGGCTTTAGGTGTTGGGGACTTGGACTTTGTTTCATGCAGTAGCACAGTGTATGCAGCAATGATGCAAGACTGGATGAGAAATCTTGAAGTGGGTATTCCTGCTCTTCTTGAGGATGGAATCGAGGTGCTTGTCTATGCTGGAGAAGAAGATCTCATTTGCAATTGGCTTGGGAATTCAAGGTGGGTTCATGCAATGGAATGGTCAGGTAAAAAAGAATTTGGGGCATCTCCTGCAGTCCCATTTTTGGTTGATGGTGCAGAAGCTGGAATGCTGAAAAGCCATGGACCACTGGCTTTCCTCAAGGTAAACGAGGCTGGTCATATGGTCCCTATGGATCAACCAAAAGCGGCACTTCAGATGCTTAGAACCTGGATGCAAGGGAAACTGACAATGACAAAGGGTGGAGATAATGTCTCTCCTAAATGA 1533 0.4325 MASSSRFLKMCLFSTLLFLIFISPSFSSPYYPTSNDLRFSSTASLPKLMAEKLIRGLNLFPKDSINTLVNDPHDVTGTIVEKRFTFPSLAASAPSVEDLGHHAGYYRLPRSKAARMFYFFFESRNSKDDPVVIWLTGGPGCSSELALFYENGPFQFTKNLSLVWNDYGWDNASNILFVDQPTGTGFSYTSDDSDIRHDEEGVSNDLYDFLQAFFKEHPQFTKNDFYITGESYAGHYIPALASRVHQGNKAKEGIHINLKGFAIGNGLTNPEIQYQAYTDYALDRGLIKKADYDRIKKLIPPCEQAIKTCSTEGGDTCTSSLYVCDDIFNQILSVAGNINYYDIRKQCEGSLCYDFSNVETFLNKKNVREALGVGDLDFVSCSSTVYAAMMQDWMRNLEVGIPALLEDGIEVLVYAGEEDLICNWLGNSRWVHAMEWSGKKEFGASPAVPFLVDGAEAGMLKSHGPLAFLKVNEAGHMVPMDQPKAALQMLRTWMQGKLTMTKGGDNVSPK* 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g2168 510 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 38 499 IPR001563 GO:0004185|GO:0006508
Apr2g2168 510 PANTHER SERINE CARBOXYPEPTIDASE 3 38 499 - -
Apr2g2168 510 Pfam Serine carboxypeptidase 98 496 IPR001563 GO:0004185|GO:0006508
Apr2g2168 510 PRINTS Carboxypeptidase C serine protease (S10) family signature 165 177 IPR001563 GO:0004185|GO:0006508
Apr2g2168 510 PRINTS Carboxypeptidase C serine protease (S10) family signature 178 188 IPR001563 GO:0004185|GO:0006508
Apr2g2168 510 PRINTS Carboxypeptidase C serine protease (S10) family signature 213 238 IPR001563 GO:0004185|GO:0006508
Apr2g2168 510 PRINTS Carboxypeptidase C serine protease (S10) family signature 466 479 IPR001563 GO:0004185|GO:0006508
Apr2g2168 510 Gene3D alpha/beta hydrolase 80 507 IPR029058 -
Apr2g2168 510 ProSitePatterns Serine carboxypeptidases, serine active site. 227 234 IPR018202 GO:0004185
Apr2g2168 510 SUPERFAMILY alpha/beta-Hydrolases 100 497 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g2168 Apr-Chr2 26817054 26820379 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g2168 K16298 - gmx:100785987 885.174
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g2168 2 26817054 26820379 Apr2g2168 2 26817054 26820379 ECH
Apr3g1322 3 27661937 27672450 Apr2g2168 2 26817054 26820379 PCT