Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g1290 ATGAGCAAGAGGCTCATTGCTGAAGAGGATTTGAAAAGTTTAAGTATGGGGTTTTCTAGTTCTTTCTTGATCGGCTTTCTTCTTCTTGCTGCGGTGCTCAATGTAACTAATGGGCAGCCTCTGGTTCCTGCATTGTTCATATTTGGGGACTCGGTTGTTGATGTGGGCAATAATAACCGTTTATTAACTGTTATTAAAGCAAACTTCCCTCCTTATGGAAGAGACTTTGAGAATCACAATCCAACAGGAAGGTTCTGCAATGGAAAGCTAGCCACAGACTTCACTGCTGAAACCCTTGGATTTACCTCCTATCCACCTGCTTACCTCAACTTGAAGTCCAAAGGAAAGAACCTCTTGAATGGTGCCAACTTTGCCTCAGCTGGTTCTGGTTACCTTGAATCTACAGCCAAACTATATAATGCAATTCCATTGAGCCAGCAGCTAGAAAACTACAAGGAGTGCCAGAAGAAATTGATGGTTGTAGCAGGGAAATCAAGTGCTTCATCAATTATATCTGGTGCTATATATCTTGTTAGTGCAGGGAACAGTGATTTTGTTCAGAACTATTACATAAATCCTCTGCTTAACAAGCTTTATACAACTGATCAATTCTCAGACATGATCATGCGATACTATTCCAGTTTCATCCAGAATTTATATGCACTGGGAGCAAGGAAGATTGGTGTGACAACATTACCTCCAATAGGTTGCCTACCTGCATCCATCACTCTCTTTGGTCTTCTTAGAAATGACTGTGTGGCCAATCTAAATAGTGATGCTATTAACTTCAATGAAAAGCTCAATACCACATCTCTGAACTTGCAAAACATGCTTCCTGGCCTCAATTTGGTCATCTTTGATATCTACCAACCTCTATATAACCTAGTCACCAAACCTTCTGAAAATGGATTTTTTGAAGCAAGGAAGGCTTGTTGTGGAACTGGTTTGATAGAGACATCTATATTGTGCAATAATAAGTCCATAGGAACTTGTGCTAATGCGTCTGAATATGTGTTTTGGGATGGTTTTCATCCCTCAGAAGCTGCAAACAAGGTTTTGGCAGATGATTTGATTGCTGCTGGCATCTCTCTTATATCCTAA 1101 0.4024 MSKRLIAEEDLKSLSMGFSSSFLIGFLLLAAVLNVTNGQPLVPALFIFGDSVVDVGNNNRLLTVIKANFPPYGRDFENHNPTGRFCNGKLATDFTAETLGFTSYPPAYLNLKSKGKNLLNGANFASAGSGYLESTAKLYNAIPLSQQLENYKECQKKLMVVAGKSSASSIISGAIYLVSAGNSDFVQNYYINPLLNKLYTTDQFSDMIMRYYSSFIQNLYALGARKIGVTTLPPIGCLPASITLFGLLRNDCVANLNSDAINFNEKLNTTSLNLQNMLPGLNLVIFDIYQPLYNLVTKPSENGFFEARKACCGTGLIETSILCNNKSIGTCANASEYVFWDGFHPSEAANKVLADDLIAAGISLIS* 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g1290 366 PANTHER GDSL ESTERASE/LIPASE EXL3 22 365 - -
Apr3g1290 366 SUPERFAMILY SGNH hydrolase 45 358 - -
Apr3g1290 366 CDD SGNH_plant_lipase_like 43 358 IPR035669 -
Apr3g1290 366 PANTHER GDSL-MOTIF LIPASE 22 365 - -
Apr3g1290 366 Pfam GDSL-like Lipase/Acylhydrolase 45 356 IPR001087 GO:0016788
Apr3g1290 366 Gene3D SGNH hydrolase 34 362 IPR036514 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g1290 Apr-Chr3 27392783 27394814 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g1290 40 357 Acyl Lipid Metabolism Gene Families AT4G10950 33.645 1.69e-65 211
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g1290 - - gmx:100775618 575.859
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g1290 3 27392783 27394814 Apr3g1290 3 27392783 27394814 ECH
Apr2g2143 2 26593876 26595548 Apr3g1290 3 27392783 27394814 PCT