Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g2143 ATGGGGCATTCAAGTTACATCTTGACTTCCTTGCTTCTGGTTGTAGTGTTAAACGTGGCTAAAGGACAACCTTTGGTCCCTGCATTGTTCATATTTGGGGATTCTGTGGTTGATGCGGGCAATAATAACCACTTATATACTATTGTTAAAGCAAACTTCCCTCCTTATGGAAGAGACTTCAAGAATCACACTTCAACAGGGAGGTTTTGCAACGGAAAGCTTGCATCAGATTACACTGCTGAAAACCTTGGATTTACCTCTTACCCACCAGCTTACCTCAACTTAAAGGCCAAAGGAAAGAACCTCTTGAATGGTGCCAATTTTGCCTCAGCTGCTTCCGGCTACTATGATCCTACAGCCAAACTATATCATGCAATTCCATTGAGCCAGCAGCTGGAACATTACCAAGAGTGCCAGAATATATTGGTGGGAATAGCAGGGAAGTCAAATGCTTCATCAATTGTGTCTGGTGCTATATATCTTATCAGTGCTGGAAACAGTGACTTTATTCAGAACTATTACATAAATCCACTGCTTTACAAGGTTTACACTGCTGATCAATTCTCAGACATTCTCATGCAACGCTTTGCCACTTTCATTAAGAATTTATATGCACTTGGAGCAAGGAAGATTGGTGTGACATCATTACCTCCAATGGGTTGTCTGCCAGCAGCCATCACTCTCTTTGGCTCTGATAGTAACAAATGCGTGGCAAGACTAAACAGTGATGCTGTTAACTTCAATAAAAAGCTAAACACTACATCTCAGAGCTTGCAAAAATTGCTTTCTGGTCTCAAACTGGTTGTCCTTGATATCTACCAACCTCTCTATGACCTTGTTACTAAGCCTTCTGAAAACGGATTTTTTGAAGCAAGGAAGGCTTGTTGTGGAACAGGCTTGCTAGAGACATCTATATTGTGCAATCAAAAGTCCATAGGAACATGTGCCAATGCATCTGAATATGTATTCTGGGATGGTTTTCATCCCTCAGAGGCTGCAAACAAGATTTTGTCCGATGATTTGCTAGCTGCTGGCATCTCTCTCATATCCTAA 1053 0.4141 MGHSSYILTSLLLVVVLNVAKGQPLVPALFIFGDSVVDAGNNNHLYTIVKANFPPYGRDFKNHTSTGRFCNGKLASDYTAENLGFTSYPPAYLNLKAKGKNLLNGANFASAASGYYDPTAKLYHAIPLSQQLEHYQECQNILVGIAGKSNASSIVSGAIYLISAGNSDFIQNYYINPLLYKVYTADQFSDILMQRFATFIKNLYALGARKIGVTSLPPMGCLPAAITLFGSDSNKCVARLNSDAVNFNKKLNTTSQSLQKLLSGLKLVVLDIYQPLYDLVTKPSENGFFEARKACCGTGLLETSILCNQKSIGTCANASEYVFWDGFHPSEAANKILSDDLLAAGISLIS* 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g2143 350 Pfam GDSL-like Lipase/Acylhydrolase 29 340 IPR001087 GO:0016788
Apr2g2143 350 PANTHER GDSL ESTERASE/LIPASE EXL3 8 349 - -
Apr2g2143 350 SUPERFAMILY SGNH hydrolase 29 341 - -
Apr2g2143 350 PANTHER GDSL-MOTIF LIPASE 8 349 - -
Apr2g2143 350 CDD SGNH_plant_lipase_like 27 342 IPR035669 -
Apr2g2143 350 ProSitePatterns Lipolytic enzymes "G-D-S-L" family, serine active site. 29 40 IPR008265 GO:0006629|GO:0016298
Apr2g2143 350 Gene3D SGNH hydrolase 18 346 IPR036514 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g2143 Apr-Chr2 26593876 26595548 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g2143 19 341 Acyl Lipid Metabolism Gene Families AT4G10950 33.436 1.26e-63 206
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g2143 - - gmx:100804640 622.083
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g2143 2 26593876 26595548 Apr2g2143 2 26593876 26595548 ECH
Apr2g2143 2 26593876 26595548 Apr3g1290 3 27392783 27394814 PCT