Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g1288 ATGGCGCGCGTAGATCTGGACGGTAACGCTATCAAGCCGTTGACGATCTGCATGATCGGCGCCGGCGGCTTCATCGGATCGCACCTCTGCGAGAAACTAATGTCTGAAACTCCTCACAAGGTTCTCGCGTTGGACGTGTACAACGACAAGATCAAACACCTTCTCGAACCCGATTCTCTTCCTTGGGCTGGTCGCATCACTTTCCACCGTCTCAACATCAAGCACGATTCGAGGCTCGAAGGCCTTATCAAGATGGCAGATCTCACAATAAATCTGGCTGCAATTTGTACTCCCGCGGATTACAACACACGCCCTCTCGACACCATTTACAGCAATTTCATCGACGCGCTCCCTGTGGTGAAGTACTGTTCGGAAAATAACAAGCGGCTTATTCATTTCTCTACTTGTGAAGTGTATGGGAAAACAATTGGAAGCTTTCTGCCCAAAGATAGCGCCCTTCGTAAGGATCCGGCATACTATGTTCTTAAAGAAGACGAGTCTCCCTGCATTTTTGGTTCAATTGAAAAGCAGAGATGGTCATATGCATGTGCAAAACAATTGATTGAGAGGCTGATTTATGCTGAGGGTGCTGAAAATGGCTTGGAGTTCACAATTGTGAGGCCTTTTAATTGGATTGGACCAAGAATGGATTTCATTCCTGGCATTGATGGTCCGAGTGAGGGCGTTCCTCGGGTTCTGGCATGCTTTAGCAATAATCTCCTCAGGGGAGAGCCCCTCAAGCTTGTGGACGGTGGCCAGTCCCAGAGAACCTTTGTTTACATTAAAGATGCTATTGAAGCTGTCTTATTGATGATTGAAAATCCTGCCAGGGCCAATGGTCAAATCTTTAATGTGGGTAACCCAAACAATGAGGTTACAGTTAAGCAGCTTGCTGAAATAATGATTCAGGTTTACTCAAAGGTAAGTGGAGAACAAACTCCTGAAACGCCTACGATTGATGTAACCTCTAAAGAATTTTATGGTGAGGGATACGATGACAGTGATAAGAGAATTCCTGATATGACCATAATAAACAGACAGCTTGGATGGAATCCTAAGACTTCACTTTGGGACCTGCTTGAATCTACACTGACCTATCAGCACAGGACATATGCTGAAGCTGTTAAGAAAGCCATTGCAAAACCTGTTGCAAGTTGA 1158 0.4551 MARVDLDGNAIKPLTICMIGAGGFIGSHLCEKLMSETPHKVLALDVYNDKIKHLLEPDSLPWAGRITFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSALRKDPAYYVLKEDESPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRGEPLKLVDGGQSQRTFVYIKDAIEAVLLMIENPARANGQIFNVGNPNNEVTVKQLAEIMIQVYSKVSGEQTPETPTIDVTSKEFYGEGYDDSDKRIPDMTIINRQLGWNPKTSLWDLLESTLTYQHRTYAEAVKKAIAKPVAS* 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g1288 385 PANTHER BIFUNCTIONAL POLYMYXIN RESISTANCE PROTEIN ARNA 1 384 - -
Apr3g1288 385 Pfam NAD dependent epimerase/dehydratase family 16 286 IPR001509 -
Apr3g1288 385 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 15 368 IPR036291 -
Apr3g1288 385 Gene3D - 14 377 - -
Apr3g1288 385 PANTHER - 1 384 - -
Apr3g1288 385 CDD Arna_like_SDR_e 15 370 IPR045869 GO:0016831
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g1288 Apr-Chr3 27363357 27366311 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g1288 K12449 - gmx:102667779 759.214
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g1288 3 27363357 27366311 Apr3g1288 3 27363357 27366311 ECH
Apr2g2142 2 26587347 26590193 Apr3g1288 3 27363357 27366311 PCT