Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g2142 ATGGCTTCTGGGAGAGTAGATCTGAATGGGAACCCCATAAAGCCAATCACCATTTGCATGATTGGTGCAGGAGGCTTCATTGGGTCTCACCTTTGCGAGAAGCTGATGTCGGAGACACCTCACAAGGTTCTTGCTTTGGATGTCTACAATGACAAGATCAAACACCTCTTGGAACCCGACACGCTTCCTTGGACTGGTCGAATTCAATTCCACCGCCTCAACATCAAGCAAGATTCAAGACTCGAGGGTCTCATCAAGATGGCAGATCTGACCATTAATCTCGCTGCTATATGCACTCCTGCGGATTACAACACGCGCCCTTTGGACACCATTTACAGCAATTTCATCGACGCGCTTCCGGTGGTGAAGTACTGTTCGGAAAACAACAAGCGTTTGATTCATTTTTCGACATGTGAAGTGTATGGGAAAACTATTGGGAGCTTTCTCCCTAAGGATAGCCCTCTTCGTAAGGATCCTGCATACTATGTTCTTAAAGAAGATGAGTCTCCTTGCATTTTTGGTTCAATTGAAAAGCAGAGATGGTCATATGCCTGTGCTAAGCAGTTGATTGAGAGGCTTATATACGCTGAGGGTGCTGAAAACGGTTTGGAGTTCACAATTGTGAGACCTTTTAATTGGATTGGACCACGAATGGATTTCATTCCTGGCATTGATGGACCAAGTGAGGGTGTTCCTAGGGTTCTTGCATGCTTTAGCAATAATCTCCTCCGCCGAGAACCCCTCAAGCTTGTGGATGGTGGCCAATCCCAGAGGACTTTTGTGTATATCAAGGATGCTATTGAAGCTGTCTTATTGATGATCGAAAATCCTGCCAGGGCCAATGGGCACATTTTTAATGTGGGAAATCCAAACAATGAGGTTACAGTTAGGCAGCTTGCTGAAATGATGACTCAGGTTTATTCAAAGGTAAGTGCAGAACCACCTTTGGAAAAACCTACTATTGATGTAAGCTCCAAAGAATTTTATGGTGAGGGATACGATGATAGTGACAAGAGAATTCCTGACATGACCATAATTAATAGACAACTTGGTTGGAATCCTAAGACCTCACTTTGGGATCTGCTTGAATCCACTCTCACCTATCAGCACAGGACTTACGCTGAAGCCATTAAGAAGGTCATTGCAAAGCCCATGGCAAGTTAA 1164 0.445 MASGRVDLNGNPIKPITICMIGAGGFIGSHLCEKLMSETPHKVLALDVYNDKIKHLLEPDTLPWTGRIQFHRLNIKQDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRKDPAYYVLKEDESPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRREPLKLVDGGQSQRTFVYIKDAIEAVLLMIENPARANGHIFNVGNPNNEVTVRQLAEMMTQVYSKVSAEPPLEKPTIDVSSKEFYGEGYDDSDKRIPDMTIINRQLGWNPKTSLWDLLESTLTYQHRTYAEAIKKVIAKPMAS* 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g2142 387 Pfam NAD dependent epimerase/dehydratase family 18 288 IPR001509 -
Apr2g2142 387 PANTHER - 5 386 - -
Apr2g2142 387 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 17 370 IPR036291 -
Apr2g2142 387 PANTHER BIFUNCTIONAL POLYMYXIN RESISTANCE PROTEIN ARNA 5 386 - -
Apr2g2142 387 CDD Arna_like_SDR_e 17 372 IPR045869 GO:0016831
Apr2g2142 387 Gene3D - 16 378 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g2142 Apr-Chr2 26587347 26590193 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g2142 16 382 Miscellaneous Gene Families AT1G02000 21.594 2.61e-07 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g2142 K12449 - gmx:100792879 764.607
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g2142 2 26587347 26590193 Apr2g2142 2 26587347 26590193 ECH
Apr2g2142 2 26587347 26590193 Apr3g1288 3 27363357 27366311 PCT