Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g1281 ATGGTTGAATCTCAACCCAAGTTCTTCATCCCAGACTCAATCCAAGGGGTGAATTTGGATGTGGCTGCACAGATTAACATGGTTTGGGAAGTGATCAAGGCACCATTGATAGTTCCATTGCTCAATGTTGGGGTGTACATTTGCTTAGCAATGGCCCTTATGCTGTTCATGGAGAGGGTGTATATGGGCATTGTCATAATCTTGGTGAAGCTCTTTTGGAAGAAACCAGAACAACGTTACAAGTATGAGCCACTCCAAGATGATGTGGAACTAGGAAGCTCTAACTTCCCTGTGGTTCTTGTGCAAATTCCAATGTTCAATGAAAAAGAGGTGTACAAGGTGTCAATTGGAGCAGCTTGTAATCTTTCATGGCCTGCGGACCGTCTAGTGATCCAAGTCCTTGATGATTCTACTGACCCTGCTATAAAGCAAATGGTGGAGATGGAGTGCCAAAGATGGGCAAGCAAAGGCATAAACATAACGTACCAAATCAGAGAAAACAGAACGGGGTACAAAGCAGGTGCTCTCAAAGAAGGTCTAAAACGCAACTATGTGAAGCACTGCGAATATGTGGCCATTTTCGATGCAGATTTCCGGCCAGAACCTGATTTTCTAAGGCGTGCCATTCCTTTCTTAGTGGGCAACCCTGACATTGCTCTTGTGCAAGCTCGTTGGAGATTTGTGAATGCGGATGAGTGTTTGTTGACAAGAATGCAAGAGATGTCTCTGGATTACCATTTCACTGTGGAGCAAGAAGTTGGATCAGCCACTCATGCTTTCTTTGGTTTCAACGGTACAGCTGGTGTTTGGAGAATAGGAGCTATCAATGAAGCAGGAGGGTGGAAAGACAGAACAACAGTGGAAGATATGGACCTTGCAGTTCGTGCTAGTCTTAGGGGATGGAAATTTTTGTACCTTGGAGACCTTCAGGCAAAAAGTGAACTTCCCAGTACTTTGAGAGCCTTCAGATTCCAGCAGCATCGATGGTCTTGTGGTCCTGCTAATCTGTTCCGCAAAATGGTGATGGAGATAGTAAGAAACAAGAAAGTTAAGTTTTGGAAGAAGGTGTACGTTATATACAGCTTCTTCTTTGTTCGAAAAATCATAGCTCACATGGTCACCTTCTTCTTCTACTGTGTTGTGATTCCCCTTACAATTTTGATCCCTGAGGTTCATGTTCCAATATGGGGAGCTGTTTATATTCCTTCCGTCATTACCATTCTCAATTCAGTTGGAACGCCAAGGTCCATTCACCTTTTGTTCTACTGGATCCTCTTTGAGAATGTGATGTCTTTGCACCGTACCAAGGCAACCTTTATAGGCCTACTAGAAGCTGGAAGGGCCAATGAATGGGTTGTAACTGAAAAACTTGGTGATTCTGTCAACATAATGTCTAATGTTTTCTTTTCTTGTTTGATGAATAACAGACTTAATTTACTGGAGCTGGGATTTGCTATCTTCCTGTTCTTCTGTGGATGCTATGATTTTGTGCATGGGAAACACAACTACTTTATCTACCTTTTCCTTCAGACAATCACTTTCTCCATTGTAGGATTTGGCTATGTTGGCACCATTGTGTAA 1581 0.4282 MVESQPKFFIPDSIQGVNLDVAAQINMVWEVIKAPLIVPLLNVGVYICLAMALMLFMERVYMGIVIILVKLFWKKPEQRYKYEPLQDDVELGSSNFPVVLVQIPMFNEKEVYKVSIGAACNLSWPADRLVIQVLDDSTDPAIKQMVEMECQRWASKGINITYQIRENRTGYKAGALKEGLKRNYVKHCEYVAIFDADFRPEPDFLRRAIPFLVGNPDIALVQARWRFVNADECLLTRMQEMSLDYHFTVEQEVGSATHAFFGFNGTAGVWRIGAINEAGGWKDRTTVEDMDLAVRASLRGWKFLYLGDLQAKSELPSTLRAFRFQQHRWSCGPANLFRKMVMEIVRNKKVKFWKKVYVIYSFFFVRKIIAHMVTFFFYCVVIPLTILIPEVHVPIWGAVYIPSVITILNSVGTPRSIHLLFYWILFENVMSLHRTKATFIGLLEAGRANEWVVTEKLGDSVNIMSNVFFSCLMNNRLNLLELGFAIFLFFCGCYDFVHGKHNYFIYLFLQTITFSIVGFGYVGTIV* 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g1281 526 PANTHER - 5 526 - -
Apr3g1281 526 Pfam Glycosyl transferase family group 2 190 389 IPR001173 -
Apr3g1281 526 PANTHER BNAC09G36340D PROTEIN 5 526 - -
Apr3g1281 526 SUPERFAMILY Nucleotide-diphospho-sugar transferases 94 377 IPR029044 -
Apr3g1281 526 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 88 316 IPR029044 -
Apr3g1281 526 CDD CESA_CaSu_A2 97 333 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g1281 Apr-Chr3 27276781 27283032 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g1281 5 526 Miscellaneous Gene Families AT5G22740 80.755 0.0 906
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g1281 K13680 - gmx:100802752 989.178
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g1281 3 27276781 27283032 Apr3g1281 3 27276781 27283032 ECH
Apr2g2134 2 26512601 26517812 Apr3g1281 3 27276781 27283032 ECH