Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g2134 ATGGATGAAGCCAATCCCAAAATTTTCATACCAAACACGGTCGAGGGAGTGTGTTCGCACGTGGCTGGGCAGATTCAACTGATTTGGGAAGTTTACAAGGTGTCCATTGGAGCAGCATGTGGGCTTTCTTGGCCCAATGACCGTCTCGTCATTCAAGTCCTCGATGATTCTACCGACCCACTCATTAAGCAAATGGTGGAGGAAGAATGTGAGAGGTGGGCTCGGAAAGGGATAAACATAACGTACCAAATAAGAGAGAACAGAACGGGTTACAAAGCGGGTGCACTCAAAGAAGGGTTGAAACGAAGCTATGTGAATCATTGTGAGTACGTGGCCATTTTCGACGCGGATTTCAGGCCAGAGCCAGGTTTTCTAAGGCGAGCAATTCCTTTCTTGGTGGGTAACCCTCAACTTGCTCTGGTTCAGGCTCGTTGGAGATTTGTGAATGCGGATGAATGTTTGTTGGCAAGAATGCAAGAGATGTCCCTTGATTATCATTTCACAGTAGAGCAAGAAGTTGGGTCAGCCACTCATGCATTCTTTGGTTTTAATGGGACAGCGGGTGTATGGAGAATTGCTGCTATCAACGAAGCAGGAGGGTGGAAAGATAGAACAACAGTGGAGGACATGGATCTTGCTGTTCGTGCCAGTCTTAGGGGCTGGAAATTTATGTACCTTGGAGACCTTCAGGCAAACAGTGAGCTTCCTAGTACTCTTAGGGCATTTCGCTTCCAGCAGCATCGATGGTCTTGTGGTCCTGCTAATCTATTTCGCAAAATGGTGATGGAGATAGTTAGGAACAAGAAAGTAAAATTTTGGAAGAAAGTGTACGTTATCTACAGCTTTTTCTTTGTTCGTAAAATCATAGCTCACATGGTCACCTTCTTCTTCTATTGTGTTGTGCTTCCCTTAACAATTTTGGTCCCTGAGGTTCATGTTCCAATTTGGGGAGCTGTTTATATTCCTTCCATCATCACCATCCTCAATTCAGTTGGAACACCAAGGTCCATTCACCTTTTGTTCTATTGGATCCTTTTTGAGAATGTGATGTCATTACACCGTACAAAGGCCACCCTCATCGGTCTGCTAGAAGCTGGGAGAGCCAATGAGTGGGTTGTTACTGAAAAACTTGGAGACTCTGTCAATAATAAGAATAAAGCAGGAGGTGCTGCCAAGAACAAGATCAATGTCACCAAAGCAAAAAAAAAATTTCGATTCAAATTTGGTGAAAGACTTCATTTATTGGAGCTTGGATTTGCTGCCTTCCTCTTCCTCTGTGGATGCTATGACTTCGCGCATGGCAAGAACAACTACTTTGTGTACCTCTTCCTTCAGACCATAACCTTCTCAATTGTAGGATTTGGCTATGTTGGCACCATTGTCTAA 1386 0.4423 MDEANPKIFIPNTVEGVCSHVAGQIQLIWEVYKVSIGAACGLSWPNDRLVIQVLDDSTDPLIKQMVEEECERWARKGINITYQIRENRTGYKAGALKEGLKRSYVNHCEYVAIFDADFRPEPGFLRRAIPFLVGNPQLALVQARWRFVNADECLLARMQEMSLDYHFTVEQEVGSATHAFFGFNGTAGVWRIAAINEAGGWKDRTTVEDMDLAVRASLRGWKFMYLGDLQANSELPSTLRAFRFQQHRWSCGPANLFRKMVMEIVRNKKVKFWKKVYVIYSFFFVRKIIAHMVTFFFYCVVLPLTILVPEVHVPIWGAVYIPSIITILNSVGTPRSIHLLFYWILFENVMSLHRTKATLIGLLEAGRANEWVVTEKLGDSVNNKNKAGGAAKNKINVTKAKKKFRFKFGERLHLLELGFAAFLFLCGCYDFAHGKNNYFVYLFLQTITFSIVGFGYVGTIV* 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g2134 461 PANTHER - 30 461 - -
Apr2g2134 461 SUPERFAMILY Nucleotide-diphospho-sugar transferases 36 298 IPR029044 -
Apr2g2134 461 Pfam Glycosyl transferase family group 2 110 319 IPR001173 -
Apr2g2134 461 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 28 236 IPR029044 -
Apr2g2134 461 PANTHER BNAC09G36340D PROTEIN 30 461 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g2134 Apr-Chr2 26512601 26517812 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g2134 30 461 Miscellaneous Gene Families AT5G22740 83.641 0.0 750
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g2134 K13680 - gmx:100788761 789.645
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g2134 2 26512601 26517812 Apr2g2134 2 26512601 26517812 ECH
Apr2g2134 2 26512601 26517812 Apr3g1281 3 27276781 27283032 ECH