Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g1236 ATGACAAACTGTTTCCTCTTCTTCATATCAGTGCTTTTGCTTCTTCTCCACATTTCGGATTTATTTGTGCAAATCCATGGCCTTCCTTTTGGAATCAACTATGGACAGAAAGCTAACAATTTACCTCCTCCATCTCAAGTGGCTGTTCTTATAAAATCTATGAATGTAAGTAGGATCAAACTCTATGATGCTGATCCAATTGTTCTTGTTGCCTTCTCCCAATCCAATGTGGAATTCGTTATAGGACTTGGAAATGAGTCCTTGCAGAACATGACAAACGCTGCTAAAGCTCAAACATGGATTCAGCAGTATGTTCAACCTTACCTTTCACAGACTAATATCACTTGCATCACTGTGGGAAATGAAGTCTTAGACAGCAATGATACTCAGCAAATGTTCAACCTTCTTCCAGCAATGCAAACTTTGCATGATGCCCTTGTTGATCTTGGACTAGACCAACAAGTTACTGTCACAACCGCACATTCTTTTAACATATTAGCCAATTCCTACCCTCCTTCATCTGGGGCTTTTAGGGAAGATCTTATGCAATATATCCAACCCCTTCTTAACTTTCATGCACAAATCAACTCACCTTTCCTCATCAATGCATATCCTTTCTTTGCATACAAGGATAACCCAAATGAGGTTCCTTTAAACTATGTCCTTTTTCAGCCAAATCCAGGTTTGGTTGATCCAAATACCAATTTGCATTATGATAATATGTTGTATGCTCAAATTGATGCTGTCTATGCTGCCATCAAAGCAATGGGGCATACTGATATTGAAGTAAGGATTTCTGAGACTGGTTGGCCTTCTAAGGGTGACCCTGATGAGGTTGGAGCTACACCACAGAATGCAGCATTGTACAATGGTAACTTGCTGCAAAGGATTGAGCAGAAGGAAGGCACTCCTGCAAAGCCATCAGTTCCAATTGATATATATGTGTTTGCACTTTTTAATGAGGATTTGAAGCCTGGTCCAGCATCAGAGAGGAACTATGGCCTTTACTATCCTGATGGTACTCCAGTTTATAACATTGGATTACAAGGTTATCAACCACAGATGCCTATGGCCTCCAAATCCAATGCTATGTATGTCAATTTTCTTGTTTGTGTAATTACATGCTTGATCTTTGCTTGGGTGCTATCAAGATCATGA 1158 0.3981 MTNCFLFFISVLLLLLHISDLFVQIHGLPFGINYGQKANNLPPPSQVAVLIKSMNVSRIKLYDADPIVLVAFSQSNVEFVIGLGNESLQNMTNAAKAQTWIQQYVQPYLSQTNITCITVGNEVLDSNDTQQMFNLLPAMQTLHDALVDLGLDQQVTVTTAHSFNILANSYPPSSGAFREDLMQYIQPLLNFHAQINSPFLINAYPFFAYKDNPNEVPLNYVLFQPNPGLVDPNTNLHYDNMLYAQIDAVYAAIKAMGHTDIEVRISETGWPSKGDPDEVGATPQNAALYNGNLLQRIEQKEGTPAKPSVPIDIYVFALFNEDLKPGPASERNYGLYYPDGTPVYNIGLQGYQPQMPMASKSNAMYVNFLVCVITCLIFAWVLSRS* 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g1236 385 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE 14 5 363 - -
Apr3g1236 385 SUPERFAMILY (Trans)glycosidases 30 346 IPR017853 -
Apr3g1236 385 Gene3D Glycosidases 29 353 - -
Apr3g1236 385 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 5 363 IPR044965 GO:0004553|GO:0005975
Apr3g1236 385 Pfam Glycosyl hydrolases family 17 31 346 IPR000490 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g1236 Apr-Chr3 26837386 26841086 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g1236 80 382 Glycoside Hydrolase AT2G27500 66.118 2.40e-155 438
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g1236 - - ccaj:109798347 650.203
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g1236 3 26837386 26841086 Apr3g1236 3 26837386 26841086 ECH
Apr2g2092 2 26173946 26176616 Apr3g1236 3 26837386 26841086 PCT