Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g2092 ATGTCCAAGATCAGATCAGTAATGGCAACATGTTCCTTCCTATTCAGAGGATTATTGCTTCTTCTCACGGTTTCGGATTTGTTTGAGCAAACTAGAGGCATTAATTTTGGAATCAACTACGGGCAAATAGCCAACAATCTTCCATCTCCCTCACGTGTGGCTGTTCTTATAAAATCTCTGAATGTCACCAGAATCAAACTCTATGATGCTGATCCAAATGTTCTATCTGCATTCTCCAATTCAGATGTAGAATTCATCATAGGACTTGGAAATGAGTATCTCCAAAGCATGAGAGACCCTTCCAAGGCTCAGAGCTGGGTTCAACAGCATGTTCAACCTTACATTTCACAGACCAAAATCACATGCATAACTGTAGGAAATGAAGTCTTCAACAGCAATGATACTCAGCTCACAATGAACCTCCTCCCTGCAATGCAAAGTGTGTATAATGCCCTTGTTAATCTTGGACTATCTCAACAAGTTACTGTCACAACTGCTCATTCTTTCAACATTTTATCCAACTCTTTCCCTCCCTCATCTGGCTCTTTTAGTCAAGATCTGATACAATATATCCAACCCCTTCTTAACTTTCATGCTCAAATCAAATCACCCTTCCTCATTAATGCATATCCTTTCTTTGCATACAAGGACAACCCAAATCAAATTTCCTTAAACTATGTGCTGTTTCAGCCAAATTTAGGGTCCACTGATCCAAACACCAATTTACATTATGATAACATGTTGTATGCTCAAATTGATGCTGTCTATGCTGCCATGAAAGCACTGGGGCATACTGATATTGAAGTCAGGATTTCAGAAACTGGTTGGCCTTCTAAGGGTGACCCTGATGAGGTTGGAGCCACACCAGAAAATGCAGAAATATATAATAGTAATTTGTTGAAGAGGATAGAACAGAAGCAAGGCACTCCTGCAAATCCATCCGTTCCAATTGATATTTTTGTCTTTGCACTTTTCAATGAGGATTTGAAACCTGGTCCTATATCAGAGAGAAACTATGGCCTTTATTATCCTGATGGTACCCCAGTTTACAACATTGGGCTACAGGGTTATCTACCAGAAATGGTTATAGAATCCAAATCCAATGCTTTGGCTATCAATTTTCTCATCTATCTACTTACATGCTTGGTGTTGGCCTGGGAGCTTTCAAGATAG 1173 0.3964 MSKIRSVMATCSFLFRGLLLLLTVSDLFEQTRGINFGINYGQIANNLPSPSRVAVLIKSLNVTRIKLYDADPNVLSAFSNSDVEFIIGLGNEYLQSMRDPSKAQSWVQQHVQPYISQTKITCITVGNEVFNSNDTQLTMNLLPAMQSVYNALVNLGLSQQVTVTTAHSFNILSNSFPPSSGSFSQDLIQYIQPLLNFHAQIKSPFLINAYPFFAYKDNPNQISLNYVLFQPNLGSTDPNTNLHYDNMLYAQIDAVYAAMKALGHTDIEVRISETGWPSKGDPDEVGATPENAEIYNSNLLKRIEQKQGTPANPSVPIDIFVFALFNEDLKPGPISERNYGLYYPDGTPVYNIGLQGYLPEMVIESKSNALAINFLIYLLTCLVLAWELSR* 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g2092 390 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 14 371 IPR044965 GO:0004553|GO:0005975
Apr2g2092 390 Gene3D Glycosidases 35 358 - -
Apr2g2092 390 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE 14 14 371 - -
Apr2g2092 390 SUPERFAMILY (Trans)glycosidases 36 353 IPR017853 -
Apr2g2092 390 Pfam Glycosyl hydrolases family 17 37 352 IPR000490 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g2092 Apr-Chr2 26173946 26176616 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g2092 86 386 Glycoside Hydrolase AT2G27500 67.550 7.82e-160 450
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g2092 - - gmx:100786020 712.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g2092 2 26173946 26176616 Apr2g2092 2 26173946 26176616 ECH
Apr2g2092 2 26173946 26176616 Apr3g1236 3 26837386 26841086 PCT