LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Apr3g1232	ATGACAGAGGTTCTCCACTCTCCAACATCACCAACACCCCATTTTTCTTCTTCTTCTTCATCTTCAACCAGTCCTTCCTCTGATGGCATTCTCCTTGTTAGCACTGACCAAGAACCACCCTCTTCCTCTGAGCTGTCCCTTTTGGCCATTCTTGTGACCCTTTTCAGAAAGTCATTGATTGCTTGCAAGAGTGACAGAAGAGAGCTTTGTCCCATGGAGATTGGTTGGCCCACTAACGTGCGCCATGTTGCGCATGTCACCTTTGATAGGTTCAATGGGTTCTTGGGTTTGCCTGTTGAATTTGAACCTGAAGTTCCCAGAAGGCCTCCCAGTGCTAGTGCAACTGTTTTTGGAGTTTCAACAGAATCCATGCAATTATCATACGACTCAAGAGGGAACAGTGTACCAACAATACTGCTACTAATGCAAAGGAACTTGTATGCTCAAGGAGGGTTGCAGGCAGAGGGGATTTTCAGAATTAATGCAGATAATAGTCAAGAGGAATATGTTAGGGATCAATTAAATAGGGGCCTGGTCCCAGAAGGCGTTGATGTACATTGTTTGGCTGGACTAATTAAGGCTTGGTTTAGGGAACTGCCTACTGGTGTTCTGGATCCTTTATCCCCAGAGCATGTAATGCAATGCCAGACTGAAGAGGATTGTGCTGAACTGGCAAGGCAGCTACCTCTCACTGAAACTTCCCTCTTAGACTGGGCTATCAATCTGATGGCTGATGTTGTCCAAGAGGAACACCTTAATAAGATGAATGCACGCAACATTGCAATGGTTTTTGCACCAAACATGACTCATATGGCAGACCCTTTGACTGCATTGATGTATGCAGTTCAAGTGATGAACTTTTTGAAGACACTAATACTAAGGACGCTGCGGGAAAGAAAGGATTCTGACGTAGAATCATCTATTGGATGTTGTTTAGAACCTTCTGATGACAATGGAGACAATAGTCTTTTGGAGTCCTGCCCACAAGATGAGGTTGCCAGAGAAAATGAAGAGGCTGAGGAAACCTTTGTTTCTGAGAAAACTGTATTAGAATGTTCTCCTGAGCCCCTACAAAACAAAAGCTCTTCTGAAGGAGAATCTGGGAGTTTGATAAGCCCTTATGGGAATCTGGTTTGTGATGATGATTTGTATTGTGAGTTTCCACCCAAAGGAAACGTTGGCAAGAATAAGATTGGCCAATCTAGTAATTCCAGTGCTAAAAAGGGGTCCAAGAAAACCAGAAGCCAGCAACATGTGATCCATGCAACAGTGACTGTTGAGAAAAAGGGTATTAGCAATTTGAGCCGCATTGATTCAAGATCAGAAAGGATAGAAGCTTGGAGGTGA	1347	0.438	MTEVLHSPTSPTPHFSSSSSSSTSPSSDGILLVSTDQEPPSSSELSLLAILVTLFRKSLIACKSDRRELCPMEIGWPTNVRHVAHVTFDRFNGFLGLPVEFEPEVPRRPPSASATVFGVSTESMQLSYDSRGNSVPTILLLMQRNLYAQGGLQAEGIFRINADNSQEEYVRDQLNRGLVPEGVDVHCLAGLIKAWFRELPTGVLDPLSPEHVMQCQTEEDCAELARQLPLTETSLLDWAINLMADVVQEEHLNKMNARNIAMVFAPNMTHMADPLTALMYAVQVMNFLKTLILRTLRERKDSDVESSIGCCLEPSDDNGDNSLLESCPQDEVARENEEAEETFVSEKTVLECSPEPLQNKSSSEGESGSLISPYGNLVCDDDLYCEFPPKGNVGKNKIGQSSNSSAKKGSKKTRSQQHVIHATVTVEKKGISNLSRIDSRSERIEAWR*	449

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Apr3g1232	448	CDD	CRIB	72	112	-	-
	Apr3g1232	448	SUPERFAMILY	GTPase activation domain, GAP	114	293	IPR008936	GO:0007165
	Apr3g1232	448	MobiDBLite	consensus disorder prediction	394	423	-	-
	Apr3g1232	448	Pfam	P21-Rho-binding domain	73	99	IPR000095	-
	Apr3g1232	448	CDD	RhoGAP	136	292	-	-
	Apr3g1232	448	SMART	RhoGAP_3	133	296	IPR000198	GO:0007165
	Apr3g1232	448	SMART	PBD_5	74	108	IPR000095	-
	Apr3g1232	448	PANTHER	MKIAA1688 PROTEIN	1	448	IPR044785	GO:0005096
	Apr3g1232	448	MobiDBLite	consensus disorder prediction	1	41	-	-
	Apr3g1232	448	Gene3D	CRIB domain	70	103	IPR036936	-
	Apr3g1232	448	ProSiteProfiles	CRIB domain profile.	74	87	IPR000095	-
	Apr3g1232	448	ProSiteProfiles	Rho GTPase-activating proteins domain profile.	119	300	IPR000198	GO:0007165
	Apr3g1232	448	MobiDBLite	consensus disorder prediction	311	368	-	-
	Apr3g1232	448	MobiDBLite	consensus disorder prediction	352	368	-	-
	Apr3g1232	448	Pfam	RhoGAP domain	138	270	IPR000198	GO:0007165
	Apr3g1232	448	MobiDBLite	consensus disorder prediction	395	423	-	-
	Apr3g1232	448	MobiDBLite	consensus disorder prediction	330	345	-	-
	Apr3g1232	448	Gene3D	Rho GTPase activation protein	107	304	IPR008936	GO:0007165
	Apr3g1232	448	PANTHER	PAK-BOX/P21-RHO-BINDING DOMAIN RHO GTPASE ACTIVATING PROTEIN	1	448	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Apr3g1232	Apr-Chr3	26805388	26809278	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Apr3g1232	-		K20642	ccaj:109798318	660.218

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Apr2g2090	2	26160000	26163299	Apr3g1232	3	26805388	26809278	PCT