Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g2090 ATGATCCAAGTCCTCCACTCTCCACCCCATTTTGCTTCATCACAAAGAACAACAACAAAGACAAGGACACCCTCAACAACCTCAACCTCTTCCTCTTCCTCTTCCTCTTCATTCTCTTCCCATGCTATTCTCCGACCACACCTTTCTCTCTTTGCTTTTCTTCTGACCCTTCTCAAGAAGAGTCTCACCAACTGCAAGCACCTTTGCTCCCCCATGGACATTGGCTCCCCCACTAATGTGCGCCATGTTGCACATGTCACCTTTGATAGGTTCAACGGTTTCTTGGGTTTGCCCGTTGAGTTTGAACCTGAAGTGCCCAGAAGGCCTCCTAGTGCTAGTGCAACTGTTTTTGGAGTTTCAACAGAATCCATGCAGCTATCGTTTGACTCAAGAGGGAACAGTGTGCCAACAATTCTGCTATTGATGCAAAGGCATCTCTACGCTCAAGGAGGGTTAAAGGTGGAGGGGATTTTCAGAATTAATGCAGACAATGGTCAAGAGGAACATGTCAGGGATCAATTGAATTTGGGAGTGGTCCCAGATGACATTGATGTACATTGTTTGGCAGGACTAATTAAGGCTTGGTTTAGGGAACTTCCTACGGGCATTCTGGATTCGTTATCACAAGAGCAAGTAATGCAATGCCAGACTGAGGAGGAATGTACTGAACTAGTGAGGCATCTACCTCATACTGAAGCTTCACTCTTGGACTGGGCCATCAATCTGATGGCTGATGTTGTCGAACATGAACATCTTAATAAGATGAATGCACGCAACATTGCCATGGTTTTTGCACCAAACATGACTCAGATGGCAGACCCTTATACTGCATTGGTGTATGCAGTTCAAGTAATGAACTTCTTGAAGACACTTATATTAAGGACAGTGCGGGAGAGAAAGGATTCTGTGATAGAATCTTATCCTAGATTATATTTAGAACCTTATGATAATGAAAATAATATACTTTCGGACTCCTGCCATCAAGATATTCCAGCAGAAAATCTAGAGACTCACGAAAATTTTGTTTTGGAGAAAACTGTCTTAGAATGTTCGTCTGAATCTCTCCAGAACAACATTTCAACTGGAGGAGAGTCTAGCAATTTGACAAGCTCTTCTGATGATCTTGTCTGCAATGAAGATTTGTATTGTGAGTTTCCACCAAAAGGAAATGTGGGGAAGAGTAAAACTGGCCAATCAAGTAAGTCCAATGCTAGAAAAGAGACCAAAAAGACCAAAGGCCAGCAACCTATGATCCATCAAACGGTGCCTGTTGAGAAAAGGGGAAATGGGAGTTTGAACTGCATAGATTCAAGATCTGAGCAGATCGAAGCCTGA 1335 0.4315 MIQVLHSPPHFASSQRTTTKTRTPSTTSTSSSSSSSSFSSHAILRPHLSLFAFLLTLLKKSLTNCKHLCSPMDIGSPTNVRHVAHVTFDRFNGFLGLPVEFEPEVPRRPPSASATVFGVSTESMQLSFDSRGNSVPTILLLMQRHLYAQGGLKVEGIFRINADNGQEEHVRDQLNLGVVPDDIDVHCLAGLIKAWFRELPTGILDSLSQEQVMQCQTEEECTELVRHLPHTEASLLDWAINLMADVVEHEHLNKMNARNIAMVFAPNMTQMADPYTALVYAVQVMNFLKTLILRTVRERKDSVIESYPRLYLEPYDNENNILSDSCHQDIPAENLETHENFVLEKTVLECSSESLQNNISTGGESSNLTSSSDDLVCNEDLYCEFPPKGNVGKSKTGQSSKSNARKETKKTKGQQPMIHQTVPVEKRGNGSLNCIDSRSEQIEA* 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g2090 444 MobiDBLite consensus disorder prediction 8 39 - -
Apr2g2090 444 CDD CRIB 72 112 - -
Apr2g2090 444 Pfam RhoGAP domain 136 270 IPR000198 GO:0007165
Apr2g2090 444 PANTHER PAK-BOX/P21-RHO-BINDING DOMAIN RHO GTPASE ACTIVATING PROTEIN 3 443 - -
Apr2g2090 444 PANTHER MKIAA1688 PROTEIN 3 443 IPR044785 GO:0005096
Apr2g2090 444 CDD RhoGAP 136 292 - -
Apr2g2090 444 SMART RhoGAP_3 133 296 IPR000198 GO:0007165
Apr2g2090 444 Gene3D CRIB domain 70 104 IPR036936 -
Apr2g2090 444 ProSiteProfiles CRIB domain profile. 74 87 IPR000095 -
Apr2g2090 444 MobiDBLite consensus disorder prediction 388 444 - -
Apr2g2090 444 ProSiteProfiles Rho GTPase-activating proteins domain profile. 119 311 IPR000198 GO:0007165
Apr2g2090 444 SMART PBD_5 74 108 IPR000095 -
Apr2g2090 444 MobiDBLite consensus disorder prediction 1 39 - -
Apr2g2090 444 Gene3D Rho GTPase activation protein 107 303 IPR008936 GO:0007165
Apr2g2090 444 SUPERFAMILY GTPase activation domain, GAP 114 293 IPR008936 GO:0007165
Apr2g2090 444 Pfam P21-Rho-binding domain 73 99 IPR000095 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g2090 Apr-Chr2 26160000 26163299 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g2090 - K20642 gmx:100776004 595.119
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g2090 2 26160000 26163299 Apr3g1232 3 26805388 26809278 PCT