Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g1200 ATGGCATCACCAAACACAAACCTAGAGAAAAAAGGGGTATTTGGTAGAGCATGGGAACGGTTAAAGGCCTTGCCTAAAGCTCTTAAGGAGAAGGTATTGGGTATTTGTAGGTTGACAAAAGAGATAGCCCAAGATGACCCTAGAAAAGTGATTCATTCACTAAAAGTGGGGCTTGCAATCTCCCTGGTTTCTCTATTCTATTACTATCAACCTCTATATGAGAATTTTGGCCTTTCAGCAATGTGGGCTGTGATGACTGTGGTGGTGGTTTTTGAATACACAGTTGGAGCCACTCTAGGCAAAGGTTTGAATAGGACAATTGCAACGCTGGCGGCTGGTGCGCTTGGTGTTGCAGCTCATTACTTAGCTAGCCTATCTGGAGATACAGGGGAACCCATATTGATTGGCGTGTTTGTCTTCATACAAGCTGCTATAGCATCATTTATAAGATTTTTTCCGAAAGTGAAGGCAAGATATGACTACGGGATGCTTATATTTATCTTGACATTCTCTTTGATATCTGTATCTGGGTTTCGAGATGATGAAGTACTATTAATGGCACACAAGAGGCTATCAACCATTTTTATAGGGGGTTCGGCTTGTGTGATGATTTCCATTTTTGTTTGTCCTGTGTGGGCCGGTGAAGAGTTCCACTATTCAATTGCTAACAAGTTAGAAATACTTGGAGACTTCTTAGAAGCGTTTGTACGTGAATACTTCAAAATATCAAAAGAAGGGGAATCTATAGACAACAAAGATGGAGATTCTGAAGACAAGAAGTCGTTTTTAGAAGGTTACAAAAAGGTTCTCAATTCTAAAAGTAGTGATGACTCTCTGGCCAATTTTGCAAGGTGGGAACCAGGTCATGGCAAGTTTAAATTTCGTCATCCTTGGAACCTATACCTCAACATTGGTGGCCTTTCTCGCCAATGTGCATATCGAATGGAAGCCCTTAATGCACACCTCAATTCTGATATCCAAGGATCCCAAGAAATTCGTTTTACAGTCCAAGAGCTCTGCTCAAAAATGTGTTTGGAATCTAGCAAAGCTTTGAAGGAACTAGGATCATCAATCAGGGCAATGACCAAGCCATCCTCTTCTGATATTAATCTTGCAAACGCAAAAGATGCAGTCAAGAACCTCAAGTCATTGCTCCAATCAAGCTTATGGAAAGAAACAGACCTTTTATCAATTATTCCAGTTGTGACAGTGGCTTCACTATTAATTGATATTGTGGATTTCACAGAGAAAATAGCAGATTCGGTTAATGATCTTGCCAACCTCACACATTTTGATACTGTAGATACAGATAAATACCCCAAAACATCACAATCTTCACAATGTGAATGTGTTGAATCGGGTCCCAAAAGTGATAACCTCCAACTCGTTATTCTAGTTGAGGAATCAGCACTAGTTGTGTCAGATAGTGAAAAATCAACATCTGATGAACATAACATAGTTTGA 1464 0.3989 MASPNTNLEKKGVFGRAWERLKALPKALKEKVLGICRLTKEIAQDDPRKVIHSLKVGLAISLVSLFYYYQPLYENFGLSAMWAVMTVVVVFEYTVGATLGKGLNRTIATLAAGALGVAAHYLASLSGDTGEPILIGVFVFIQAAIASFIRFFPKVKARYDYGMLIFILTFSLISVSGFRDDEVLLMAHKRLSTIFIGGSACVMISIFVCPVWAGEEFHYSIANKLEILGDFLEAFVREYFKISKEGESIDNKDGDSEDKKSFLEGYKKVLNSKSSDDSLANFARWEPGHGKFKFRHPWNLYLNIGGLSRQCAYRMEALNAHLNSDIQGSQEIRFTVQELCSKMCLESSKALKELGSSIRAMTKPSSSDINLANAKDAVKNLKSLLQSSLWKETDLLSIIPVVTVASLLIDIVDFTEKIADSVNDLANLTHFDTVDTDKYPKTSQSSQCECVESGPKSDNLQLVILVEESALVVSDSEKSTSDEHNIV* 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g1200 487 Pfam Aluminium activated malate transporter 41 426 IPR020966 GO:0015743
Apr3g1200 487 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 7 7 442 - -
Apr3g1200 487 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 10 7 442 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g1200 Apr-Chr3 26554154 26556903 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g1200 30 468 Miscellaneous Gene Families AT2G27240 54.299 3.17e-170 486
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g1200 - - aprc:113859727 936.021
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g1200 3 26554154 26556903 Apr3g1200 3 26554154 26556903 ECH
Apr2g2064 2 25986977 25989113 Apr3g1200 3 26554154 26556903 PCT