Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g2064 ATGGCTTCTGAAGCAAATAAAATCAATGATGGCATAGTTGCTGCCAGTGTCACCAAGGGTTGGCAAGGGTTGATGGCCTTGACTAGTGAATTTAATGCAAAGGTATTGAATGTGATGTCACAACTAAAGAAACTAGGAAAAGAAGATCCTAGAAGGGTCGTTCATGCTTTGAAAGTAGCACTTGCTATCTCCTTAGTTTCCACATTTTACTATATAAAGCCTCTTTACAATGGCTTTGGTTCATCTGCAATGTGGGCTGTTTTCACTGTCATTGTTGTATCCGAATTCTCTGTAGGAGCAACGCTTGGAAAAGGTTTGAATAGAGGTTTAGCAACATTTTTGGCTGGAGCTCTGGGGCTTGGATTTTATTACATGGTGCATTCAATTTCAGCGGGAAATATAGTAGCACCCATACTTCTTGGAACCTTAATTTTTCTAACAACTGCAGGAGTCACGTATATTCGATTTTTTCCTCAAATGAAGGCGAGATATGATTACGGGTTGCTGGTGTTTATTTTGACATTCTGTATGGTGTCTGTGTCAAGCTACAGAGACCGTGAGATCCTAGACATTGCACTGAAAAGGGTAACCACAATCCTCTCAGGTGGTTTAATTTCCATTTTAGTCAGCATTTTCGTGTACCCTATATGGGCCGGTGGTGATCTTCACAATCTACAATCACAAAATATTGAAAAACTTGGGAACTTTTTGGAAGATTTTGGAGAGGAATATTTCGGAGGTGGAGAATCAAATAAATCATTTATGCAAGGGTATAAAAGTGTTCTTAATTCAAAACAAGTTGAAGAAAACTTGGCTAATTTTGCAAGGTGGGAACCCTGCCATGGTAGTTTTAGATTTCGTCATCCTTGGCAACAATATCTAAAGATTGGAAACCTCTCAAGGCAATGTGCCTATCGTATTGATGCCCTATGTGGCTTTCTTAACTCTACTAAGACACCATTAGAAATCAGAAGCAAAATAGAAGAGCCATGCATCAAGATGAGCACAGAAACAGGGAAGGCTTTAAAGGAATTAGCAGTGGCAATGCATAAAATGGTTCCACCATCAGCTGCAGACCCTCACATTGCCAAATCCAAGATTGCTGCCACAAACCTCAGGTCCATCATCAAAACAGGATTATGGGAAGACACCAATCTCTTTGAGGTTATTCCTGTTCTTACTGTGGCTTCTCTGTTGGTTGATGTGGTTTCTTATACTGAGAAACTAGAAGAGTCAATACAAGAACTATCCACCCTAGCAAAATTTAAGAACAAGGACGATAAAGAGGACCCAAAGCGTCCTCATCAAGAGGAAGCTCCAAAACCATGTTGTTGTGACAACATTGGGCTTCATCATGTTATTACAATCAACCAACCTTCTGCAGTAAACTTGTCACATAATGGAAATTCCTAA 1413 0.3984 MASEANKINDGIVAASVTKGWQGLMALTSEFNAKVLNVMSQLKKLGKEDPRRVVHALKVALAISLVSTFYYIKPLYNGFGSSAMWAVFTVIVVSEFSVGATLGKGLNRGLATFLAGALGLGFYYMVHSISAGNIVAPILLGTLIFLTTAGVTYIRFFPQMKARYDYGLLVFILTFCMVSVSSYRDREILDIALKRVTTILSGGLISILVSIFVYPIWAGGDLHNLQSQNIEKLGNFLEDFGEEYFGGGESNKSFMQGYKSVLNSKQVEENLANFARWEPCHGSFRFRHPWQQYLKIGNLSRQCAYRIDALCGFLNSTKTPLEIRSKIEEPCIKMSTETGKALKELAVAMHKMVPPSAADPHIAKSKIAATNLRSIIKTGLWEDTNLFEVIPVLTVASLLVDVVSYTEKLEESIQELSTLAKFKNKDDKEDPKRPHQEEAPKPCCCDNIGLHHVITINQPSAVNLSHNGNS* 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g2064 470 Pfam Aluminium activated malate transporter 44 417 IPR020966 GO:0015743
Apr2g2064 470 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 10 24 431 - -
Apr2g2064 470 PANTHER ALUMINUM ACTIVATED MALATE TRANSPORTER FAMILY PROTEIN 24 431 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g2064 Apr-Chr2 25986977 25989113 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g2064 34 420 Miscellaneous Gene Families AT1G08440 51.768 2.55e-150 436
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g2064 - - aprc:113855925 914.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g2064 2 25986977 25989113 Apr3g1200 3 26554154 26556903 PCT