Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g1194 ATGTCAGCAACTTCTATGACTTTGACCAACAACAAAGTTCAAAGCCAACAAGGCTTGTTATCTTCCTCTGTAAAGACAGAGGAAGAGACTACGATGCTGAAGCAAAAGCAAGGCATCATCACCATTTTGGACTCAAACACAGCCTCAGCGTCTTCTTCTCTACGAAGGACTCTTTCTGCGGACATGTCATCAAAGAAATGGCTCTCTCAAAGCATGAAGAACATTGCTTCATGTGAGGAACTCTTGCATTCCAAAACCATTGCTGAATCACTCTCCTCTTCTTCTTCTTCTTCTGAAGATGAAGAGAACAAGGATCTTGACGCTGAAGCTGAAAGAGAGAGGCTTGAGATTTGGAGTTCAATCCAAAGGAACAAAAAGGAGGAGCAAGAGAAAGGGGGGCCATTTGATACATGGAGCTCAATCGTATCCCTCAAGGCCAATGATGAAATCTCAAAATCTCTTCCTGTGACTCCCTATGTTCACCCTCTCGTGAAAAGATCAAAAAGCTCTTTGAGTGAAAAGAGCCTTGAAATTTGCACTGAGAGTCTTGGCTCCGAAACTGGCTCTGATGGCTTGTTTTCCTCTTCCCCTTCATCTGAAACAGGGGATATGGAAGAAGAAGAAGAGAAAGTTACTTATGAAGAACAACAACAGCAAGAAGAAGAGTTACAAGTGCCAAAGTACAATTATGCTGCAACAGCTACAAAAAAGCTTTCAACACCACGCTCTTTCCCTCCACCACTTCCTTCACTCTCTCATCATCAAACTAGTCCCTCACTTCACATGCGTTCCCATCGTGACAATGGAAGGTTGGTCCTCCAAGCTGTGTCTGTTCCTTCTCTTAACAATTTTAATGTTCAACGCCAAGAGGGTCGTCTTGTACTCACTTTTGCCAATCAGCAAAAGGAGGAGGAGGAGGAGGTGGAAGAGAATGATGATGATGTGGAGCAGTTGGAGGAAGAGAGTTTTGGAGGAAAAGAATACTATGAGGGTGAAGAGGAAGAAGAGGCTGTGGAATATGAGAGTGATGATAGGGATGTGGAGAGTGTGATGGAGAAAGCGCCTTTGTTGTCAAGTGGGATAAGTAGTGGTGTTCGTGGGATGGCTTTGATGATGAATAAGCCAAATGGGTTGGTGAATAGGAACCCAAAGTGGTCAGAGAAGTTCAATGAAATGACCAATTTTGAGGATGTTAATGTGATGGAAGTGAAACCAAGTCAAGTGGCACAATCACTTCCTCCAAGGCCAAGGGTGGCTAGGTTGATTCCATCAGCACCAGCTGTGGCATCAGTTGCTGCAGCAGCAGCAGCAGCTTCTTTCAATTTTAATGCTTATGAGTACTATTGGAGGACCAAGCCTCCATCAAAAGTTACCAGTGTTAACCCACTTGACAAAGACAAACATCATCAACAAAACAATGAGTCACCCTTGAAAAGCAATAAGGTTGTTGTCTCTGGGGACATGAACAAGGTCTCCAATGAGCAAAAGCAGTTGTTGATTCTAAGAGGGAAGAATGGTGATTACTTGGTGCATAATTTGAAGAGTTGCAAGGATTCTAGAAGGTCTTTTCTGTTTTGGGAACCCTATTGCATTGCCACCTCCTGA 1605 0.4361 MSATSMTLTNNKVQSQQGLLSSSVKTEEETTMLKQKQGIITILDSNTASASSSLRRTLSADMSSKKWLSQSMKNIASCEELLHSKTIAESLSSSSSSSEDEENKDLDAEAERERLEIWSSIQRNKKEEQEKGGPFDTWSSIVSLKANDEISKSLPVTPYVHPLVKRSKSSLSEKSLEICTESLGSETGSDGLFSSSPSSETGDMEEEEEKVTYEEQQQQEEELQVPKYNYAATATKKLSTPRSFPPPLPSLSHHQTSPSLHMRSHRDNGRLVLQAVSVPSLNNFNVQRQEGRLVLTFANQQKEEEEEVEENDDDVEQLEEESFGGKEYYEGEEEEEAVEYESDDRDVESVMEKAPLLSSGISSGVRGMALMMNKPNGLVNRNPKWSEKFNEMTNFEDVNVMEVKPSQVAQSLPPRPRVARLIPSAPAVASVAAAAAAASFNFNAYEYYWRTKPPSKVTSVNPLDKDKHHQQNNESPLKSNKVVVSGDMNKVSNEQKQLLILRGKNGDYLVHNLKSCKDSRRSFLFWEPYCIATS* 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g1194 534 MobiDBLite consensus disorder prediction 300 350 - -
Apr3g1194 534 MobiDBLite consensus disorder prediction 181 263 - -
Apr3g1194 534 MobiDBLite consensus disorder prediction 90 110 - -
Apr3g1194 534 MobiDBLite consensus disorder prediction 1 28 - -
Apr3g1194 534 MobiDBLite consensus disorder prediction 458 480 - -
Apr3g1194 534 PANTHER FANTASTIC FOUR-LIKE PROTEIN (DUF3049) 30 533 IPR021410 -
Apr3g1194 534 Coils Coil 204 224 - -
Apr3g1194 534 Coils Coil 298 321 - -
Apr3g1194 534 Pfam Fantastic Four meristem regulator 243 297 IPR046431 -
Apr3g1194 534 MobiDBLite consensus disorder prediction 181 200 - -
Apr3g1194 534 PANTHER PROTEIN FAF-LIKE, CHLOROPLASTIC 30 533 - -
Apr3g1194 534 MobiDBLite consensus disorder prediction 201 215 - -
Apr3g1194 534 MobiDBLite consensus disorder prediction 303 343 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g1194 Apr-Chr3 26427455 26430997 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g1194 - - aprc:113858041 860.907
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g1194 3 26427455 26430997 Apr3g1194 3 26427455 26430997 ECH
Apr2g2058 2 25897845 25899673 Apr3g1194 3 26427455 26430997 PCT