Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g2058 ATGTCAACTTGTATGAGTAAGAGAATAGAGGAAGAGAGTATGGTGATGCAGAAGCAGGGCATTGTCACCATTTTGGTCTCTAACTACGATGTTGCTCCCACTTCTCTGAGACGAACACTATCAGCAGACATGTCTTCCAAGACATGGCTTTCTCAAAACGGGTTATCTCCCATGAAAAAGACTGTTTCCTCAGAAGAACTCTCTCACTCACAGTCACTCCAAAAATTAACTGTTGCTGCTGACTCATCTTCCTCGTCTGAAGGAGAAGATGAGTACGAAGAAATGAAGCGAGAACGGTTCCAAATTTGGCAGGAACCGGAACAGTTTGATATGTGGAGCTCAATTTTGTCCCACAAAGAGGAAACCTCCAAAGTAACAACAACAACAACGACGACCCCTTATGTTCACCCTCTTGTGAGAAGGTCAAAAAGCTGTTTGAGTGAAAAGAGTTTGGAGATATGCACCGAGAGTCTTGGATCCGAGACTGGCTCAGATGCGTTCTCTTCTTATCCACCATCTGAGACAGGGGATTCAGAGGAAGAAGAAGAAGAAGTAACAGTGCATAGCACACACGAAGAAGAGTTTCTTGTGCCCAAATATAATTATGCTGCTAAGAAGTCTTTGCCTCGTTGTTTCCCCCCTCCACTCTCTTCTCTCTCTCCTCAACATGGTCCTTCACTCCACATGCAATCCCACCGTGACAATGGAAGATTATTCCTACAAGCTGTTTGCGTTCCTTCACACAAAAATTTTTGTGCACAACGCCAAGATGGTCGCTTAATCCTCACCTTTTCTAGGAATCCTAATGAGGAAGAAGAAGAGAAAGATGTAGCGGAGGAGTTGGAGGAAGAGTTTGATCATGAGGCAGAGCAAGTTGAGAGGGGGATGAAGCAAGCAACTATATTGTCTAGTGGGATTTCAAATGTTCATAGGTTAGCTTTAATGATGAATAAACCAATTGGGTTAGTTAACACTAGTTGGAGTCAAAGATGGTCTGAGAAGTTCAACGATGTGACCAATTTTAAGGATGTTAATGTGGTCCAACATAGTCCACTGCCACCTAGGCCAAGGGCTAGGTTAATTCATTCCTCACCAGCTTCGGGTTCTTTTAATGCTTATGAATACTACTGGCGGACCAAGCCCAAAGCCCAAGCTACTTCTGTTCCAAGCCCATTTACCATTCACCAGAAAAACTACTCATCCTTGGAGAACCATAGTAATCAAACTTCAAATGACCAACAAGAGTTGCGGGTTTTGAGAGGGAAAAAGGGTGATTACTTGGTTCACAATTTGAAAAATTGCAAGGATTCTAGAAGGTCTTTTCTTTTCTGGGAGCCGTATTGCATTGCTACTTGA 1356 0.4314 MSTCMSKRIEEESMVMQKQGIVTILVSNYDVAPTSLRRTLSADMSSKTWLSQNGLSPMKKTVSSEELSHSQSLQKLTVAADSSSSSEGEDEYEEMKRERFQIWQEPEQFDMWSSILSHKEETSKVTTTTTTTPYVHPLVRRSKSCLSEKSLEICTESLGSETGSDAFSSYPPSETGDSEEEEEEVTVHSTHEEEFLVPKYNYAAKKSLPRCFPPPLSSLSPQHGPSLHMQSHRDNGRLFLQAVCVPSHKNFCAQRQDGRLILTFSRNPNEEEEEKDVAEELEEEFDHEAEQVERGMKQATILSSGISNVHRLALMMNKPIGLVNTSWSQRWSEKFNDVTNFKDVNVVQHSPLPPRPRARLIHSSPASGSFNAYEYYWRTKPKAQATSVPSPFTIHQKNYSSLENHSNQTSNDQQELRVLRGKKGDYLVHNLKNCKDSRRSFLFWEPYCIAT* 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g2058 451 MobiDBLite consensus disorder prediction 157 192 - -
Apr2g2058 451 PANTHER PROTEIN FAF-LIKE, CHLOROPLASTIC 5 451 - -
Apr2g2058 451 MobiDBLite consensus disorder prediction 70 85 - -
Apr2g2058 451 PANTHER FANTASTIC FOUR-LIKE PROTEIN (DUF3049) 5 451 IPR021410 -
Apr2g2058 451 Coils Coil 271 298 - -
Apr2g2058 451 MobiDBLite consensus disorder prediction 157 174 - -
Apr2g2058 451 Pfam Fantastic Four meristem regulator 212 264 IPR046431 -
Apr2g2058 451 MobiDBLite consensus disorder prediction 70 95 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g2058 Apr-Chr2 25897845 25899673 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g2058 - - aprc:113855465 842.032
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g2058 2 25897845 25899673 Apr2g2058 2 25897845 25899673 ECH
Apr2g2058 2 25897845 25899673 Apr3g1194 3 26427455 26430997 PCT