Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g1160 ATGACTTGGAAAAGCAGAGGAGACTTTCCTTCTAGAAGCGTTATATCGCAGAAATGGGCACTTTTTCTGTGCTTGGGAAGTTTCTGTGCTGGGATGCTCTTCACTAACAGGATATGGAGTATTCCTGAACAGAAAGGACTTGCACGAACAACAGCTACAGATGATGATAAGTTGAGTCTAGTTTCTGAGGGTTGTAATTCAAGAATTTTGCAAGAGATGGAAATGAAGCGCGAAACTAGAGACATTTATAGTGAAGTTTTCAAGAGTCATAATTCCATACAAAATTTGGACAAGACTATTTCGAATTTAGAGATGGAATTGGCAGCTGCAAGGGCAGCTCATGAGTCTCTGCGAAATGGTGCTCCTGTTCCAGACGATATAAGGATGAGTGAATCATCGGGTAAGAGAAAGTACCTAATGGTCATAGGTATTAATACTGCATTTAGCAGCCGGAAAAGAAGGGACTCGGTTCGGGCTACTTGGATGCCACAAGGTGAGAAAAGAAAGAAGCTAGAGGAAGAAAAGGGAATTATCATCCGCTTTGTAATTGGACACAGTGCTACATCAGGGGGTATTCTAGACAGAGCTATCGAAGCAGAGGACAGAAAGCATGGAGATTTCTTGAGGCTGAATCATGTTGAAGGATACCTTGAATTGTCAGCAAAGACAAAGACATACTTTGCCACTGCAGTGAACTTGTGGGATGCTGACTTCTATGTCAAAGTTGATGATGATGTTCATGTAAATATAGCAACACTGGGAGAAACTCTAGTTAGACACCGATCAAAACAACGGATATACATTGGATGCATGAAATCTGGACCTGTCCTATCTCAAAAAGGGGTAAGGTACCATGAACCGGAGCATTGGAAGTTTGGGGAGTCTGGAAACAAGTACTTCCGTCATGCCACTGGGCAGTTGTATGCCATTTCAAACGATTTGGCTACATACATATCAATAAACCAGAATGTTCTTCACAAGTATGCCAATGAGGATGTGTCACTGGGATCTTGGTTTATTGGACTTGATGTGGAACATATAGATGATCGAAGACTTTGCTGTGGCACTCCTCCAGATTGTGAGTGGAAGGCCCAGGCAGGCAATATTTGTGTTGCTTCATTTGATTGGACCTGCAGTGGAATTTGTAGGTCTGCTGAAAGGATCAAAGAGGTGCATAGGAGGTGTGGAGAAGGTGAGAATGCTTTGTGGAGTGCCTCTTTCTAG 1224 0.4273 MTWKSRGDFPSRSVISQKWALFLCLGSFCAGMLFTNRIWSIPEQKGLARTTATDDDKLSLVSEGCNSRILQEMEMKRETRDIYSEVFKSHNSIQNLDKTISNLEMELAAARAAHESLRNGAPVPDDIRMSESSGKRKYLMVIGINTAFSSRKRRDSVRATWMPQGEKRKKLEEEKGIIIRFVIGHSATSGGILDRAIEAEDRKHGDFLRLNHVEGYLELSAKTKTYFATAVNLWDADFYVKVDDDVHVNIATLGETLVRHRSKQRIYIGCMKSGPVLSQKGVRYHEPEHWKFGESGNKYFRHATGQLYAISNDLATYISINQNVLHKYANEDVSLGSWFIGLDVEHIDDRRLCCGTPPDCEWKAQAGNICVASFDWTCSGICRSAERIKEVHRRCGEGENALWSASF* 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g1160 407 Pfam Galactosyltransferase 152 349 IPR002659 GO:0006486|GO:0016020|GO:0016758
Apr3g1160 407 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 7 399 IPR002659 GO:0006486|GO:0016020|GO:0016758
Apr3g1160 407 Pfam Domain of unknown function (DUF4094) 16 112 IPR025298 -
Apr3g1160 407 Coils Coil 93 120 - -
Apr3g1160 407 Gene3D - 134 352 - -
Apr3g1160 407 PANTHER BETA-1,3-GALACTOSYLTRANSFERASE 4-RELATED 7 399 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g1160 Apr-Chr3 26157197 26161714 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g1160 1 407 Glycosyltransferase AT1G05170 77.150 0.0 690
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g1160 K20855 - gmx:100794838 754.977
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g1160 3 26157197 26161714 Apr3g1160 3 26157197 26161714 ECH
Apr2g2019 2 25528071 25532483 Apr3g1160 3 26157197 26161714 PCT