Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g2019 ATGACTTGGAAAAGCAGGGGAGAGTTGCTTCCTAGAAGCGTCATGTCACAGAAATGGGTGATTTTCCTGTGTATCGGAAGCTTCTGTGCTGGGATGGTTTTCACCAACAGAATGTGGATTATGCCTGAACCTAAAGGACTAGCACGGACAACAGCCATGGAAGCTGAAAAATTGAATGTAGTTTCAGAGGGTTGTAATTCGAGAATTTTGCAAGAGAAGGAAGTGAAGCGTGACACTAAGGGCATCTATAGGGAAGTTTTCAAGTCACAAAATGCTATACAAACCTTGGACAAGACCATTTCAAACTTGGAGATGGAATTGGCTGCTGCAAAGGCAGCTCAAGAGTCTATAAGAAGTGGGGCTCCTGTGCCTGAAGATATCAAGATGAATGAATCGTCTGGTAGGAGAAGGTACCTAATGGTTGTAGGAATTAATACTGCTTTCAGCAGCAGAAAAAGAAGAGACTCAGTTCGTGAGACATGGATGCCACAAGGGGAGAAAAGAAAGAAGCTAGAGGAAGAGAAGGGCATCATTATCCGCTTTGTAATTGGTCATAGTGCCACATCTGGGGGTATTCTAGACAGAGCTATTGAAGCAGAAGATAAGAAGCACGGAGATTTCCTGAGACTGGATCATGTTGAAGGGTACCTTGAATTGTCGGCAAAGACAAAGACCTACTTTGCCACTGCTGTTAACTTGTGGGTTGCTGACTTCTATATCAAAGTTGATGACGATGTTCATGTAAATATAGCTACACTGGGACAAACTCTAGTTAGACACCGATCAAAACGACGTGTATACATTGGGTGTATGAAATCTGGGCCTGTTCTGTCTCAAAAAGGGGTAAGGTACCATGAACCAGAATACTGGAAATTTGGAGAGGCTGGAAACAAGTACTTTCGTCATGCCACGGGACAGTTGTATGCCATTTCCAAAGATCTAGCCACATATATTTCAACAAACCAGCACGTTCTTCACAAGTATGCTAATGAAGATGTCTCACTAGGGTCTTGGTTTATCGGACTTGATGTGGACCACATAGATGATAGGAGACTATGTTGTGGTACACCACCAGATTGTGAATGGAAAGCACAAGCAGGCAATGTTTGTGTTGCTTCATTTGACTGGACATGCAGTGGAATTTGTAGATCTGCTGAGAGGATCAAAGAGGTACACAAGAGATGTGGAGAAGGTGAGAAAGCTTTGTGGAATGCCTCTTTCTAA 1224 0.4314 MTWKSRGELLPRSVMSQKWVIFLCIGSFCAGMVFTNRMWIMPEPKGLARTTAMEAEKLNVVSEGCNSRILQEKEVKRDTKGIYREVFKSQNAIQTLDKTISNLEMELAAAKAAQESIRSGAPVPEDIKMNESSGRRRYLMVVGINTAFSSRKRRDSVRETWMPQGEKRKKLEEEKGIIIRFVIGHSATSGGILDRAIEAEDKKHGDFLRLDHVEGYLELSAKTKTYFATAVNLWVADFYIKVDDDVHVNIATLGQTLVRHRSKRRVYIGCMKSGPVLSQKGVRYHEPEYWKFGEAGNKYFRHATGQLYAISKDLATYISTNQHVLHKYANEDVSLGSWFIGLDVDHIDDRRLCCGTPPDCEWKAQAGNVCVASFDWTCSGICRSAERIKEVHKRCGEGEKALWNASF* 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g2019 407 Coils Coil 93 113 - -
Apr2g2019 407 Pfam Domain of unknown function (DUF4094) 16 112 IPR025298 -
Apr2g2019 407 PANTHER HEXOSYLTRANSFERASE 8 399 - -
Apr2g2019 407 Pfam Galactosyltransferase 152 349 IPR002659 GO:0006486|GO:0016020|GO:0016758
Apr2g2019 407 Gene3D - 136 351 - -
Apr2g2019 407 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 8 399 IPR002659 GO:0006486|GO:0016020|GO:0016758
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g2019 Apr-Chr2 25528071 25532483 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g2019 1 407 Glycosyltransferase AT1G05170 77.150 0.0 685
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g2019 K20855 - gmx:100793931 796.964
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g2019 2 25528071 25532483 Apr2g2019 2 25528071 25532483 ECH
Apr2g2019 2 25528071 25532483 Apr3g1160 3 26157197 26161714 PCT