Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g1153 ATGGATTCTACATCAGTGCGTAAGGACGTTGATGAACCTTTGCTTGTTCCGAGCGAGCCACCACCACCTTCTTTGACTCAATCATCAAACTCCAATTCCAAACATGGATCAGATGGCGAGCTTGAGCGAATACTCGCAGATACAAGTGTCCCTTTGTTAAGGCGTCTTGGACCCGCAACATGGGTGGAGTTGAAGCTTTTGCTTCGCCTTGCTGCCCCAGCTGTTGTTGTCTACCTTATTAACTATGTCATGTCTATGTCCACCCAAATCTTTTCCGGCCACCTCGGTAACCTCGAACTTGCTGCTGCTTCCCTTGGAAACACCGGCATCCAAATCTTCGCTTATGGACTTATGTTGGGTATGGGGAGTGCTGTTGAGACACTATGTGGACAAGCATATGGTGCTCAAAAGTTTGAGATGCTAGGCATATACTTGCAAAGATCAACAGTGCTTCTGACATTAGCAGGTGTACTTTTGACTGTGATATATGTTTTCTCTGAGCCAATTTTAATTTTTCTAGGGGAGTCCCCAAAAATTGCATCCGCAGCTGCAATTTTTGTCTATGGCCTAATCCCTCAAATTTTTGCCTATGCTGTGAACTTCCCTATTCAAAAGTTTCTCCAAGCGCAGAGCATAGTGGCTCCAAGTGCCTATATTTCAGCAGCAACATTGATCATCCACCTTGTGTTAAGTTGGGTGGTTGTGTACCAAGTTGGACTTGGTTTATTGGGTGCATCATTGATGTTGAGCTTTTCTTGGTGGATAATTGTGATTGCACAATTTGTGTATATTGTGAAGAGTGAAAGGTGTAAGCATACATGGAAGGGGTTCACTTTTCAAGCCTTTTCAGGGTTGCCAGAGTTCTTCAAGTTGTCAGCAGCATCAGCAGTGATGCTGTGCCTTGAGACATGGTACTTCCAAATTTTGGTTCTGCTTGCAGGATTGCTTCCTGAACCTGAGTTGGCTCTGGATTCCCTTTCTATTTGTACAACAGTGTCTGGTTGGGTTTTTATGATCTCAGTTGGATTTAACGCAGCTGCAAGTGTGAGAGTGAGCAACGAACTTGGGGCAAAGAATCCAAAATCGGCGTCATTCTCGGTTTTGGTTGTGACATTGATTTCTTTCATAATATCGATTATTATAGCAATCGTAGTGCTTGCATTACGAGATGTCATTAGCTATGTTTTCACAGAGGGCGAAGAGGTTGCTGCCGCTGTCTCTGATCTCTGTCCCCTCCTTGCTCTTTCCATTGTCCTCAATGGCATTCAACCTGTCTTATCTGGGGTGGCTGTTGGATGTGGATGGCAAACTTTTGTTGCCTATGTAAACGTTGGTTGTTATTATGGAATTGGCATACCATTGGGTTCGGTTATGGGCTTCTATTTCAAATTGAATGCTAAGGGAATATGGGTGGGAATGCTAGGTGGCACGGTTTTGCAAACAATTATTTTGATATGGATCACTTATCGAACAGATTGGAACAAAGAGGTTGAAGAAGCAGGTAAGAGGTTGAACAAGTGGGAGGACGCAACCGAGCCACTTGTCAAGAATCGAGGTTGA 1560 0.441 MDSTSVRKDVDEPLLVPSEPPPPSLTQSSNSNSKHGSDGELERILADTSVPLLRRLGPATWVELKLLLRLAAPAVVVYLINYVMSMSTQIFSGHLGNLELAAASLGNTGIQIFAYGLMLGMGSAVETLCGQAYGAQKFEMLGIYLQRSTVLLTLAGVLLTVIYVFSEPILIFLGESPKIASAAAIFVYGLIPQIFAYAVNFPIQKFLQAQSIVAPSAYISAATLIIHLVLSWVVVYQVGLGLLGASLMLSFSWWIIVIAQFVYIVKSERCKHTWKGFTFQAFSGLPEFFKLSAASAVMLCLETWYFQILVLLAGLLPEPELALDSLSICTTVSGWVFMISVGFNAAASVRVSNELGAKNPKSASFSVLVVTLISFIISIIIAIVVLALRDVISYVFTEGEEVAAAVSDLCPLLALSIVLNGIQPVLSGVAVGCGWQTFVAYVNVGCYYGIGIPLGSVMGFYFKLNAKGIWVGMLGGTVLQTIILIWITYRTDWNKEVEEAGKRLNKWEDATEPLVKNRG* 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g1153 519 PANTHER PROTEIN DETOXIFICATION 19 504 - -
Apr3g1153 519 PANTHER MULTIDRUG RESISTANCE PROTEIN 19 504 - -
Apr3g1153 519 CDD MATE_eukaryotic 63 499 IPR045069 GO:0042910|GO:1990961
Apr3g1153 519 Pfam MatE 73 233 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Apr3g1153 519 Pfam MatE 295 455 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Apr3g1153 519 Coils Coil 490 510 - -
Apr3g1153 519 TIGRFAM matE: MATE efflux family protein 73 470 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Apr3g1153 519 MobiDBLite consensus disorder prediction 1 39 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g1153 Apr-Chr3 26082746 26088861 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g1153 K03327 - gmx:100801718 853.588
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g1153 3 26082746 26088861 Apr3g1153 3 26082746 26088861 ECH
Apr2g2015 2 25485425 25489835 Apr3g1153 3 26082746 26088861 PCT