Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g1135 ATGTTCCACCGAAGAAAAAAGGAGCATAGTACCTTGCCACTCTCCAACAACACAGAAACACCAACAACAATGCCTCCTACGAATTACACTTCAACTTTCCTCAGAAACCGAACACCACCCTTCAAATCCTTCCTCTTCGTTCTATCTCTTCTCCTTAATATTTACCTCCTCCTCGTCCTGTGGGCCCCATCCTCTTCCACGTTACCCCCAACCACTCTCATCTCACGCCTCTCCCCAACCACGCGCCGCCACGTCATCTTCGCCATCGCGTCCTCCTCACTCTCCTGGCCGCGTCGCTTACCCTACTTACGCCTCTGGTACTCCCCCAACACCACGCGCGCCTTCGCGTTTCTCGACGCGCTGCCTTTGAATTCCTCCTCCGGTTCTTCTTCGCCGCCGGTGGTGATCTCCGGCGATACCGCCGGGTTTCCGTACACGTTCCGGGGAGGGCTCCGGTCGGCGATACGCGTGGCGCGCGTGGTGAAGGAGGTGGTGGATCGGAATGAGTCGCACGTGCGGTGGTTTGTGTTCGGAGATGATGACACCGTGTTCTTCGTGGATAACGTGGTGAGGATGCTGGCGAAGTACGACCACGAACGGTGGTTCTACGTTGGGAGCAATTCGGAGAGCTACGATCAGAACGTGAAGTACTCGTTTGAGATGGCGTTTGGAGGTGGGGGTTTCGCGATCAGTTACTCGCTCGCGAGGGTTTTAGCTAGGGTTTTGGATTCGTGTTTGAGGAGGTATGGGCATTTGTATGGTAGCGATTCAAGGATTTATTCTTGCCTCGCTGAGCTTGGTGTTGGATTAACCCATGAGCCTGGTTTTCATCAGTTAGATATGCGAGGGAATTTGTTTGGGATGCTGGCTGCACATCCTTTATCTCCTTTGCTGTCCCTTCATCACTTGGATGCGGTGGAGCCCCTCTTTCCGAACATGGACAGAGTACAAGCTTTGGAACATCTTATTGCAGCTGCAAATATAGATCCTGCCAGGATCCTGCAGCAAACTGTCTGCTATGATCGATCCAATTCTTTGACTTTCTCGGTTTCTTGGGGTTTTGCTATCCAGGTTTATCAAGGAAATGAACTTTTACCTGACCTCCTTTCACTGCAGAGAACTTTTGTGCCATGGAGGAGGGGTAGTAAAGTTGATCCGAATTTTATGTTTAACACAAGAGACTATCCTAGAGATCCTTGCAAAAGGCCTTCTGTATTTTTTCTGAAAAGTGTTACATCTGATAAAGGGGGCATTTGGAGCAATTACAGCAGGCATGTTGGAAACTGCTTTGAATCAAATGCTACGCAGATCAAGCTGATCATAGTATTTTCAAGGAAGCTGGAGATGAAAGCCCTACGTCGTCAGTGCTGCGATGTTTTGCCATCTTCTAATGATACAATCAGTCTTCATATTAGACAGTGTGAAATCGACGAACTGATCTCCATGCAATCGTAG 1455 0.4962 MFHRRKKEHSTLPLSNNTETPTTMPPTNYTSTFLRNRTPPFKSFLFVLSLLLNIYLLLVLWAPSSSTLPPTTLISRLSPTTRRHVIFAIASSSLSWPRRLPYLRLWYSPNTTRAFAFLDALPLNSSSGSSSPPVVISGDTAGFPYTFRGGLRSAIRVARVVKEVVDRNESHVRWFVFGDDDTVFFVDNVVRMLAKYDHERWFYVGSNSESYDQNVKYSFEMAFGGGGFAISYSLARVLARVLDSCLRRYGHLYGSDSRIYSCLAELGVGLTHEPGFHQLDMRGNLFGMLAAHPLSPLLSLHHLDAVEPLFPNMDRVQALEHLIAAANIDPARILQQTVCYDRSNSLTFSVSWGFAIQVYQGNELLPDLLSLQRTFVPWRRGSKVDPNFMFNTRDYPRDPCKRPSVFFLKSVTSDKGGIWSNYSRHVGNCFESNATQIKLIIVFSRKLEMKALRRQCCDVLPSSNDTISLHIRQCEIDELISMQS* 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g1135 484 PANTHER GLYCOSYLTRANSFERASE 36 482 - -
Apr3g1135 484 Gene3D - 75 304 - -
Apr3g1135 484 PANTHER FRINGE-RELATED 36 482 - -
Apr3g1135 484 Pfam Protein of unknown function, DUF604 213 457 IPR006740 -
Apr3g1135 484 MobiDBLite consensus disorder prediction 13 29 - -
Apr3g1135 484 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g1135 Apr-Chr3 25914022 25917389 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g1135 80 484 Glycosyltransferase AT4G15240 64.407 0.0 548
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g1135 - - gmx:100813277 729.169
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g1135 3 25914022 25917389 Apr3g1135 3 25914022 25917389 ECH
Apr3g1135 3 25914022 25917389 Apr2g1997 2 25335115 25336814 PCT