Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g1997 ATGAAGTCATTTCATAATCTTATCAGAACCCAACCTCTGATGAAATTCATTTTAGTCTCCTCTTCACTTTGTGCCATTTCTCTATCTATATCTATGCTAATCTTAGCCACACCAAAGATAGTAGAAGTGGGTTCCTCACTACAAGATGTGCCTGATCCTAACACTATTGATCATCTTGTGTTTGGAATTGCTTCAAGTGGAACTTCATGGCCTAAAAGGAAGGAATACACCAAACTTTGGTGGACCTTGAAACCCAATAAAAGAATGAGAGGGTGTGCTTTTGTGGATACCCTCCCACGTGAAGAAAATCCCAACAATGATGGTTTGCTTCCTCCTCTTTGTGTCTCTGAAGACACTTCCAAGTTTCTCTACACTTACAGGCCTGGTGGTCTAAGATCAGCAATCCGTGTGGCACGTGTTGTGAAAGAGACTTTGGCATTGAACCATTCTGGTGTTAGATGGTATGTGTTTGGAGATGATGACACCATTTTCTTCCCTCAGAATCTGGTGAAAACTCTTTCCAAATATGATCATAGGCTTTGGTACTATGTCGGGTCTTACTCTGAGATTTATGAGGCATCCCAGGGTTTTGGTTTTGGAATGGCTTTTGGTGGAGGTGGTTTTGCCATCAGTTCCTCTCTAGCAAAAGTCCTAGCCAAGTTTTTGGATTCATGTTTAGAAAGGTATCCACATTTGTATGGAAGTGATGCCAGGGTGTACTCTTGCATAACTGAACTAGGTGTGGGATTAACGCATGAACCAGGTTTTCATCAGGTTGATTTACGGGGAAATATTTTTGGCCTATTGGCTGCACATCCATTAAGCCCCTTGTTATCACTACATCACCCAGATCACACTGATCCTATCTTTCCTAACATGACAATTAGAAACTCTCTACAACATTTATTTGAGGCGGTTAATGTTGATTCCGAGAGGATCCTTCAACAAACAGTTTGCTATGAAAGGCAGTTTTCATGGACAATTTCAGTGTCATGGGGCTATGCTGTTCAAATATTCCAGAACAATTTGCTTTTGCCAGATGTTTTGAGAGCGGAAGAAACATTCAAGCAATGGAAGAAAGGAAATGTTTTGGCAGGGATATATACTTTCAATACAAGAAAACTTCACCCTGATCCATGTAAAAGACCCACTATTTTCTATCTAGACAAAGTGTCTTCTGGCAAAGATGGCATCATTAGCAGTTACAGAAAATATTTTCATAATTGCTCAAATAACAAGGACTCACTAAAGAAATTGGAAGTGATCAAAGTGGTCACAAATAAGTTAGACCTTGACAGCGAACAGACTCCAAGAAGGCACTGTTGTGATGTGTTGCCCTCTACCGCTGATGACTTAATGGAAATTGCAATCAGAGAGTGCAAAAATGAAGAACTGATTCACATGCACTGA 1410 0.4028 MKSFHNLIRTQPLMKFILVSSSLCAISLSISMLILATPKIVEVGSSLQDVPDPNTIDHLVFGIASSGTSWPKRKEYTKLWWTLKPNKRMRGCAFVDTLPREENPNNDGLLPPLCVSEDTSKFLYTYRPGGLRSAIRVARVVKETLALNHSGVRWYVFGDDDTIFFPQNLVKTLSKYDHRLWYYVGSYSEIYEASQGFGFGMAFGGGGFAISSSLAKVLAKFLDSCLERYPHLYGSDARVYSCITELGVGLTHEPGFHQVDLRGNIFGLLAAHPLSPLLSLHHPDHTDPIFPNMTIRNSLQHLFEAVNVDSERILQQTVCYERQFSWTISVSWGYAVQIFQNNLLLPDVLRAEETFKQWKKGNVLAGIYTFNTRKLHPDPCKRPTIFYLDKVSSGKDGIISSYRKYFHNCSNNKDSLKKLEVIKVVTNKLDLDSEQTPRRHCCDVLPSTADDLMEIAIRECKNEELIHMH* 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g1997 469 Pfam Protein of unknown function, DUF604 197 442 IPR006740 -
Apr2g1997 469 PANTHER TRANSFERRING GLYCOSYL GROUP TRANSFERASE 9 467 - -
Apr2g1997 469 PANTHER FRINGE-RELATED 9 467 - -
Apr2g1997 469 Gene3D - 47 285 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g1997 Apr-Chr2 25335115 25336814 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g1997 53 436 Glycosyltransferase AT1G05280 57.033 2.66e-159 457
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g1997 - - gmx:100779943 775.007
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g1997 2 25335115 25336814 Apr2g1997 2 25335115 25336814 ECH
Apr3g1135 3 25914022 25917389 Apr2g1997 2 25335115 25336814 PCT