Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g1134 ATGTTGTTTTTCCACAAACCCACCAAAGCTAAGTCTTTGGTTAACTTCATTTTAGTCTCTTCTTCATTCTGTGCCCTTTATGTTGTTGTGTCTGTGCTACTATTGGGGCCAGCAAAGCTAGTTCATATGAATAAGGGATCACAAGATGTGTCTACAGCAACCACTCTTGATCATCTTGTGTTTGGGATTGCTTCAAGCAAAGGTTCATGGCCAAAGAGGAAGGAGTATGTGAAGTTGTGGTGGAACAACAACAAAACAATGAAGGGGTGTGTGTTTGTGGATAGCATCCCAGATGAAGATCATGGTGGGAATGAGAATGATACTTCTCTTCCTCCTCTTTGTGTCTCTGAAGACACGTCAAGGTTCCGCTACACTTGCAAGGGTGGACTGAGATCAGCAATACGCGTGGCACGTGTTGTTGTGGAGACCATAGCAATGAATAATCATTCAGATGTGAGGTGGTATGTGTTTGGAGATGATGACACGGTTTTCTTCCCAGAGAATGTGGTGAAGACTTTGTCCAAATATGATCATGAGCTTTGGTACTATGTTGGGTCCCACTCTGAGGTTTATGAGCAGAACCGGTTGTTTGGTTTTGGAATGGCTTTTGGTGGTGCAGGTTTTGCTATCAGCTCCTCTCTCGCTAAAGTGTTGGTCAAGGTTTTTGATTCTTGTATAGAAAGGTACCCTCATCTTTATGGAAGTGATGGCAGGGTGTACTCTTGCTTGGCAGAGCTTGGAGTCGGGTTAACACATGAACCGGGTTTTCACCAGGTTGATTTGCGAGGAAACACCTTTGGCCTATTGGCTGCACATCCAATGTCTCCCTTGTTGTCCCTGCATCACCCGGAATACACAGATCCAATCTTTCCAAACATGACAACTACACAAGCTTTGAATCATTTATTTGAAGCTGCAAATGTTGATTCTGAGAGGATGTTGCAACAAGCAATTTGCTATGATAAATGGTTTTCATGGACAATTTCAGTGTCATGGGGCTATGCTGTTCAAATATTTCCAAACCGTATGTTTGTGTCAGATGTCTTGAAAGTGCAAGAAACATTCAAGCAATGGAAGAAGGGAAACATGTTGGCAAAATCATATACTTTTAACACAAGAGAACTTCACCCTGACCCTTGTAAGAGATCTACTATTTTCTACCTAGACAATGTGTCTTCCAACAAGGATGACATCATAAGCAGTTACAAGAAATCTTTCCAAAATTGCTCAAACAATGCGATATCCCCAAATAAACTGGAAGTGATCAAAGTGATTACAAATAAGCTAGACCTGGACATCAAGCAGGCTCCAAGAAGGCATTGTTGTGATGTGTTGCCCTCTAGTGCCGATGACCAAATGGAAATTGCAGTCAGGGAATGCAAAGATGAAGAATTAGTTTTCATGCATTGA 1410 0.4199 MLFFHKPTKAKSLVNFILVSSSFCALYVVVSVLLLGPAKLVHMNKGSQDVSTATTLDHLVFGIASSKGSWPKRKEYVKLWWNNNKTMKGCVFVDSIPDEDHGGNENDTSLPPLCVSEDTSRFRYTCKGGLRSAIRVARVVVETIAMNNHSDVRWYVFGDDDTVFFPENVVKTLSKYDHELWYYVGSHSEVYEQNRLFGFGMAFGGAGFAISSSLAKVLVKVFDSCIERYPHLYGSDGRVYSCLAELGVGLTHEPGFHQVDLRGNTFGLLAAHPMSPLLSLHHPEYTDPIFPNMTTTQALNHLFEAANVDSERMLQQAICYDKWFSWTISVSWGYAVQIFPNRMFVSDVLKVQETFKQWKKGNMLAKSYTFNTRELHPDPCKRSTIFYLDNVSSNKDDIISSYKKSFQNCSNNAISPNKLEVIKVITNKLDLDIKQAPRRHCCDVLPSSADDQMEIAVRECKDEELVFMH* 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g1134 469 Gene3D - 47 309 - -
Apr3g1134 469 Pfam Protein of unknown function, DUF604 193 442 IPR006740 -
Apr3g1134 469 PANTHER TRANSFERRING GLYCOSYL GROUP TRANSFERASE 9 467 - -
Apr3g1134 469 PANTHER FRINGE-RELATED 9 467 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g1134 Apr-Chr3 25911166 25913038 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g1134 13 436 Glycosyltransferase AT1G05280 53.241 2.49e-168 480
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g1134 - - gmx:100813816 815.068
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g1134 3 25911166 25913038 Apr3g1134 3 25911166 25913038 ECH
Apr2g1996 2 25325375 25327051 Apr3g1134 3 25911166 25913038 PCT