Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g1996 ATGCAGTTACCTCACAAAACCACAATCCAATCTTTGGTAAAGTTGCTTTTATTCTCTTCTTCATTTGGTGCCATTTACATCCTCGTATCAGTGCTACTTTTAGCCACATCATCAAAGTTAACAAATGTGCGTTCTTCATCACAAAATGTGAATGAACCTACCCCTACCACACTTGATCATCTCGTGTTTGGAATTGCCTCAAGTGGGTCTTCATGGCCTAAGAGGAAAGAATATATAAAACTATGGTGGAGCAAAAAACCTAATACAACAATGAGGGGATGTGTATTCGTGGATAAGCTTCCAAACCCACCTGAAGAAAATGCTAATAATTATGAGGATTCACTCTTTCCTTTGTGTGTCTCTGAAGATACTTCTCGGTTTCGCTACACTAGCAAGACTGGCATGCGATCAGCGCTTCGAGTGGCACGTGTTGTGAAAGAGATAGTGGCAATGAACCATTCTGATGTTAGGTGGTATGTGTTTGGGGATGATGACACGGTTTTCTTCCCTCAGAATGTGGTCAAAACTCTTTCCAAATATGATCATGATCTTTGGTACTACATTGGTGCCAACTCCGAGAGTTTTAAGCAGAACTGGTTTTGTGGCTTTGGAATGGGGTATGGTGGGGCAGGTTTTGCTATCAGTTCCTCTCTAGCAAGAGTCTTGGCCAAGGCTTTTGATTCGTGTATACAGAGGTATCCATATTTGTATGGAAGTGATGCCAGGGTGTACTCTTGTATAGCTGAACTAGGCATAGGATTAACACGAGAACCCGGCTTTCACCAGGTTGATTTACGAGGAAATATCTTTGGTTTATTGGCTGCACATCCAGTGACACCCTTGTTGTCCTTGCATCACCCGGAACTCACTGATCCAATTTTTCCGAACATGACAAATTTAAAGGCATTGCAACATTTATTTGAAGCAGTTAATGTTGATTCTCAGAGGATCCTACAACAAACCGTTTGTTATGACAAACGATTTTCATGGACAATCTCAGTGTCTTGGGGTTATGCTGTTCAGGTATACCACGGTCACATGTCTTTGCCTGATGTTCTTAAAGTTCAACAAACATTCGAGCGCTTTACAAAAGGAACTCCCTTAGCTGACCTATATAGTTTCAACATACGAGGATTTCATCCTGACCCGTGTAAAAGGCCCACTATTTTCTATCTAGACAATTTGTCCCATGGTAAAGATGGCATCATAATAAGCAGTTACAAGAAATCTTTTCAAAATTGCTCATCCAACATAGCATCACCAGAAGTTATTAAAGTGGCCACAAGTAAGCTAGACCTTAACATCAAACAGACTCAAAGAAGACATTGTTGTGATGTATTGCCCTCTAGCGTTCCTGAACTAATGGAGATTGCAATAAGAGAATGCAAAGAAGATGAATTGATTTACATGCACTGA 1416 0.4068 MQLPHKTTIQSLVKLLLFSSSFGAIYILVSVLLLATSSKLTNVRSSSQNVNEPTPTTLDHLVFGIASSGSSWPKRKEYIKLWWSKKPNTTMRGCVFVDKLPNPPEENANNYEDSLFPLCVSEDTSRFRYTSKTGMRSALRVARVVKEIVAMNHSDVRWYVFGDDDTVFFPQNVVKTLSKYDHDLWYYIGANSESFKQNWFCGFGMGYGGAGFAISSSLARVLAKAFDSCIQRYPYLYGSDARVYSCIAELGIGLTREPGFHQVDLRGNIFGLLAAHPVTPLLSLHHPELTDPIFPNMTNLKALQHLFEAVNVDSQRILQQTVCYDKRFSWTISVSWGYAVQVYHGHMSLPDVLKVQQTFERFTKGTPLADLYSFNIRGFHPDPCKRPTIFYLDNLSHGKDGIIISSYKKSFQNCSSNIASPEVIKVATSKLDLNIKQTQRRHCCDVLPSSVPELMEIAIRECKEDELIYMH* 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g1996 471 PANTHER TRANSFERRING GLYCOSYL GROUP TRANSFERASE 8 469 - -
Apr2g1996 471 PANTHER FRINGE-RELATED 8 469 - -
Apr2g1996 471 Pfam Protein of unknown function, DUF604 197 444 IPR006740 -
Apr2g1996 471 Gene3D - 48 323 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g1996 Apr-Chr2 25325375 25327051 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g1996 9 437 Glycosyltransferase AT1G05280 49.658 6.80e-152 439
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g1996 - - gmx:100778878 687.182
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g1996 2 25325375 25327051 Apr2g1996 2 25325375 25327051 ECH
Apr2g1996 2 25325375 25327051 Apr3g1134 3 25911166 25913038 PCT