Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g1131 ATGTTGCTCAATTCGTGCTTCATTTCACATGCTTGTTTTGGCAAACTTGAGAAACCCAAAGGGCCTAATCTTCTCCCACAGAGAATTATTTCCCCCCTCCGATGTGACGCAACCACAAGCGTTTCTCAAAGAAAATCAGCCAATTACCAGCCTAACCTATGGAATTACGAATTTTTGCAGTCTTTGAAGCCTGACTATGCGGATGTAAGATATGAAGACAAGGCCAGGAAGCTGCATGAGGAAGTGAGGGCAATGATTATGGATGAAAATGCAGAGATGTGGGCCAAATTAGAGCTGATTGATGATGTGAAACGACTAGGCCTTAGCTACCGCTTTGAAAAGGAAATAGGAGAAGCACTCGATAGGTTTCTCTCTTTCGAAAGATGTAATACTACAATTGTTCGCAGAAGCCTGCATGAAACTGCTTTAAGCTTCAGGCTCCTCAGAGAATATGGCTATGATGTCACAACAGATATATTTGAGAGGTTCAAGGACGACGAGGGTAATTTCAAGGCAAGTCTTAGCAAAGATGTAAAAGGCATGTTGAGTTTGTACGAGGCATCGTTTCTGGGTTACGAAGGAGAACAGATTCTGGATGAGGCTAAGGCCTTCACTAGCTTTCACCTTAAGAACCTCGACCAAGGTAGAAGCAGCAGTATCCTCGTAGAGGAAGTGAATCATGCATTGGAGCTTCCATTGCATCTTAGAATCCAAAGGCTTGAAGCACGATGGTATGTTGAATCTTATGCTAAAAGAAAGAACGCAAACGGGGTGCTGCTTGAAGCTGCCAAATTGGATTTTAACATTGTGCAGTCAACACTGCAAAATGATCTCCAAGAAATGTCAAGGTGGTGGAAAGGGATGGGACTGGCCTCAAAGTTAAGCTTTAGCCGAGATAGGTTAATGGAATGCTTCTTTTGGACGGTTGGAATGGTTTTTGAACCTCAGTTCAGTGATCTCCGCAAAGGTTTAACCAAAATCACTTCCCTAATAACTACGATCGATGACGTTTATGATGTGTACGGCACCTTAGACGAGTTAGAGCTTTTCACAGCCGCCGTTGAAAGTTGGGATGTTAAAGCAGTTCATGTTCTGCCGGATTACATGAAGATATGCTTTCTGGCACTCTACAACACTGTCAATGAATTTGCTTATGACGCGCTTAAAGAGCAAGAACAAGATATCCTTCCCTACCTCACCAAAGCATGGACTGTAATGTTGAAAGCGTTCCTGCAAGAAGCCAAGTGGTGCCGGGACAAGCACTTGCCAAACTTTGACGATTACCTGAAGAATGCGTGGGTATCAGTCTCAGGTGTTGTTATACTAACCCATGCCTATTTCTTGCTGAATCACAACATAACAAAAGAGGCACTTGAATCCTTGGACAATTACCATGCCCTCTTGAAGACACCATCCATTATTTTTCGACTTTGCAATGATTTGGGTACTTCAAAGGCGGAATTAAACAGAGGTGAAGCAGCAAGCTCGATTCTGTGTTACATGCGTGAAAGTGGTGTTAGCGAAGAGAGTGCTTATAAACACATCCACAATTTGCTTAATGAAACATGGAAGAAGATGAACAAAGATGGAATCACACATTCTCCTTTTCCAAAACCTTTCGTGGAAATAGCTATGAACCTTGCAAGAATTTCTCAATGCACATATCAGCATGGAGATGGGCATGGAGCCCCAGATAGCTCCGCGAAGAATCGCATACGGTCCTTGATAATTGAACCCATTGCCCTCAAAGACACAGGGATCTCAATTAATAATTATGAAGATTTAGTTATTTATAGTGTCAAAGATGACATTAATTTAATAGCAAAGAGACGGAACTAA 1839 0.4231 MLLNSCFISHACFGKLEKPKGPNLLPQRIISPLRCDATTSVSQRKSANYQPNLWNYEFLQSLKPDYADVRYEDKARKLHEEVRAMIMDENAEMWAKLELIDDVKRLGLSYRFEKEIGEALDRFLSFERCNTTIVRRSLHETALSFRLLREYGYDVTTDIFERFKDDEGNFKASLSKDVKGMLSLYEASFLGYEGEQILDEAKAFTSFHLKNLDQGRSSSILVEEVNHALELPLHLRIQRLEARWYVESYAKRKNANGVLLEAAKLDFNIVQSTLQNDLQEMSRWWKGMGLASKLSFSRDRLMECFFWTVGMVFEPQFSDLRKGLTKITSLITTIDDVYDVYGTLDELELFTAAVESWDVKAVHVLPDYMKICFLALYNTVNEFAYDALKEQEQDILPYLTKAWTVMLKAFLQEAKWCRDKHLPNFDDYLKNAWVSVSGVVILTHAYFLLNHNITKEALESLDNYHALLKTPSIIFRLCNDLGTSKAELNRGEAASSILCYMRESGVSEESAYKHIHNLLNETWKKMNKDGITHSPFPKPFVEIAMNLARISQCTYQHGDGHGAPDSSAKNRIRSLIIEPIALKDTGISINNYEDLVIYSVKDDINLIAKRRN* 613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g1131 612 Gene3D Farnesyl Diphosphate Synthase 51 570 IPR008949 -
Apr3g1131 612 SFLD Isoprenoid Synthase Type I 256 581 - -
Apr3g1131 612 Pfam Terpene synthase family, metal binding domain 260 525 IPR005630 GO:0000287|GO:0010333|GO:0016829
Apr3g1131 612 SFLD Terpene Cyclase Like 1 C Terminal Domain - Enzymatic 256 581 - -
Apr3g1131 612 SUPERFAMILY Terpenoid synthases 256 580 IPR008949 -
Apr3g1131 612 Pfam Terpene synthase, N-terminal domain 54 229 IPR001906 GO:0010333|GO:0016829
Apr3g1131 612 CDD Terpene_cyclase_plant_C1 44 579 IPR044814 GO:0010333|GO:0016102
Apr3g1131 612 PANTHER TERPENE SYNTHASE 12-RELATED 38 581 - -
Apr3g1131 612 Gene3D - 91 255 IPR036965 GO:0010333|GO:0016829
Apr3g1131 612 PANTHER OS04G0344100 PROTEIN-RELATED 38 581 - -
Apr3g1131 612 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 50 253 IPR008930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g1131 Apr-Chr3 25871765 25876973 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g1131 K12742 K19968 gmx:100782452 940.643
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g1131 3 25871765 25876973 Apr3g1131 3 25871765 25876973 ECH
Apr2g1985 2 25245874 25249885 Apr3g1131 3 25871765 25876973 PCT