Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g1985 ATGTCCACAAATGTTATGGCAGTTACGGAACTTACGATTTCATCGCTCACAACCTCACTTGCTTGTCACAATTCACAGTCATTCCCATATCATCCATGCAACTCATCGTTACAAACATCAAAACGAGGGATGATACATAAGAAATTATCGATCAAATCCATTGCTTTCCGAGACAAGGTACCTTGTAAAACTGATCCTAGGAGAAAAAGTTTGGATCAAGTTAAAAGAACATGTCAAGAGGCATTGCTTAACTCAAATGATCCGCTGAGAACATTGAAGATGATTGACACCATTCAAGGGCTTGGAATTGGGCACCATGTTGAAGAAGAGATCAACGTACAGCTTGGAAAGGTATGGGATTGGGACACCGCTCAAGATCTCTTTGCTACATCCATTCAATTCCGCTTGCTCAGGCATAATGGCTGGCCCACTTGTTCTGATGTATTCAAGAAATTTTTGGATAAGGGCGGAAATTTCAAGGAATCATTGACAGGAGATATTTGGGGTATGTTAAGTCTGTATGAAGCATCATATTTAGGAGCAAAAGGAGAAGAAGTATTACAACAGGCCATGGACTTCTCAAGGACTCACCTGCATCAGTCACTCCCATACCTTGGTCCTGAAGTAGGTAGACAAGTCGCCAAAGCCTTAACGCTTCCAAGATACCTAAGAATGCCTAGGTTAGAAGCCAAAAATTACCTGGAAGAATATAGTCAAGCCAACAACCAAATACCAGCTCTTCTAGAATTGGCAAAATTAGACTTTGACATGGTTCAGTCATTATACCAAAGAGAACTAGCAGAGATCTCCAGGTGGTGGAAAGAATTGGAACTAGTTGAAAGACTTGGTTTCGCGAGAGATAGACCAGCAGAGTGCTTCTTATGGACAGTGGGGATTTTTCCAGAACCACGTTTTTCAAACTGCCGCATTGAACTTACAAAAGCCATTTGCATTTTGCTAGTTATGGATGATATCTTTGACACTTATGGCTCATTAGATGAACTTGTTCTTTTTACCAAGGCAATAAAAAGGTGGCATCTTGATGCAATGGACGAGCTACCTGAATATATGAAGATATGCTATATGGCATTGTATAATACTACCCATGAAATTGCTTACAAAATTCAGAAAGAGCACGGGCTAACAGTTGTTGCTTGCTTGAAAAGAACGTGGATAGACATATTTGAAGCATTTCTAGAAGAAGCCAAATGGTTCAACAACGGACACATACCTGCTTATAGGGAATATTTGGATAATGGGGTGATTACTGCAGGATCATACATGGCCTTGGTGCATGCAACTTTCCTTATTGGTGATGACCTCTCAAAGGAAACCATTTCCATGATGAAGCCATATCCCAGGCTATTCTCTTGCTCTGGGGAGATTCTTCGCCTTTGGGATGACTTAGGAACCTCAAAGGAGGAACAAGAAAGAGGGGATAATGCTTGTAGCATTCAGTGTCTCATGAGAGAGAATGATATTTCAGATGAAAATGTTGCAAGGAGACATATAAGGCAGCTTATAGGGAACTTGTGGTCAGAGTTAAACGGCCTTGCCATGACCACATCTTCTTTGCCTCCATCAATTGTGAAGGCTTCTCTTAACATGGCTAGAACTGCTCAAGTTATTTATCAGCATGGAGACGATCAAAGCACTTTTACAGTTGATGACTATGTGCAAACATTGCTCTTTACACCCGCTACTAGCTATTGA 1713 0.4098 MSTNVMAVTELTISSLTTSLACHNSQSFPYHPCNSSLQTSKRGMIHKKLSIKSIAFRDKVPCKTDPRRKSLDQVKRTCQEALLNSNDPLRTLKMIDTIQGLGIGHHVEEEINVQLGKVWDWDTAQDLFATSIQFRLLRHNGWPTCSDVFKKFLDKGGNFKESLTGDIWGMLSLYEASYLGAKGEEVLQQAMDFSRTHLHQSLPYLGPEVGRQVAKALTLPRYLRMPRLEAKNYLEEYSQANNQIPALLELAKLDFDMVQSLYQRELAEISRWWKELELVERLGFARDRPAECFLWTVGIFPEPRFSNCRIELTKAICILLVMDDIFDTYGSLDELVLFTKAIKRWHLDAMDELPEYMKICYMALYNTTHEIAYKIQKEHGLTVVACLKRTWIDIFEAFLEEAKWFNNGHIPAYREYLDNGVITAGSYMALVHATFLIGDDLSKETISMMKPYPRLFSCSGEILRLWDDLGTSKEEQERGDNACSIQCLMRENDISDENVARRHIRQLIGNLWSELNGLAMTTSSLPPSIVKASLNMARTAQVIYQHGDDQSTFTVDDYVQTLLFTPATSY* 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g1985 570 SFLD Isoprenoid Synthase Type I 246 566 - -
Apr2g1985 570 PANTHER R-LINALOOL SYNTHASE PROTEIN-RELATED 62 567 - -
Apr2g1985 570 Pfam Terpene synthase family, metal binding domain 248 513 IPR005630 GO:0000287|GO:0010333|GO:0016829
Apr2g1985 570 SFLD Terpene Cyclase Like 1 C Terminal Domain 246 566 IPR034741 -
Apr2g1985 570 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 66 241 IPR008930 -
Apr2g1985 570 SUPERFAMILY Terpenoid synthases 245 566 IPR008949 -
Apr2g1985 570 PANTHER OS04G0344100 PROTEIN-RELATED 62 567 - -
Apr2g1985 570 Pfam Terpene synthase, N-terminal domain 70 216 IPR001906 GO:0010333|GO:0016829
Apr2g1985 570 Gene3D Farnesyl Diphosphate Synthase 68 552 IPR008949 -
Apr2g1985 570 CDD Terpene_cyclase_plant_C1 67 566 IPR044814 GO:0010333|GO:0016102
Apr2g1985 570 Gene3D - 86 243 IPR036965 GO:0010333|GO:0016829
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g1985 Apr-Chr2 25245874 25249885 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g1985 - - gmx:100807904 922.539
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g1985 2 25245874 25249885 Apr2g1985 2 25245874 25249885 ECH
Apr2g1985 2 25245874 25249885 Apr3g1131 3 25871765 25876973 PCT