Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g1122 ATGCCTGAGGCTCCAAACCACTACCATCTATGCAGCAAGCCAAATGGACAGCTTGATGATGATGGTAGTAATACTAACGTCATCAAGGACAACAACACTAAAGCACTGAAATACATTGAGGACGTTACCAGCAACACTGATGAAATTCAAGAAAGGGTCCTTGCCGAGATCCTTTCTTCCAGTGCACACGTTGAGTACCTTCAACGTCATGGCTTAGATGGGCACACAGACAGAGACACGTTCAAGAAGATCATGCCTTTGGTGACCTACGAGGATTTAAAACCAGATATTGATCGCATAGCAAATGGTGATACCTCCCCAATTTTATGTTCCAAACCAATATCTGAGTTCCTCACTAGCTCTGGAACATCTGGTGGGGAGAGAAAATTGATGCCAACCATAGAAGATGAGCTAAAGAGGAGGTCATTACTTTATAGCCTCTTGATGCCAGTGATGGATCAATTTGTACCCAATTTGGACAAGGGCAAAGGCATGTACTTTTTGTTCATAAAATCAGAAGCCAAGACCCCAGGGGGACTCCTAGCTCGTCCAGTTTTAACAAGCTACTACAAAAGTTCACACTTCAAGAATCGCACACATGGTCATGATCCTTACACAAACTACACTAGCCCCATTGAGACCATTCTCTGCTTAGATTCTTATCAAAGCATGTATTCTCAGTTGCTTTGTGGCCTTTATCAAAACCACCAAGTTCTTCGTGTTGGTGCTGTTTTTGCTTCCGGTTTCATCCGTGCCATCAAGTTCCTCGAAAAGCATTGGCTTTGTTTGTGTAATGACATTAGAAATGGGAACATAAACCCTGAAATCACTGACTCATCCGTGAGAGATGCCATCATGGAAATACTCAAGCCAAATCCAAAGCTTGCGGATTTCATAGAAGCTGAATGCAAGAAGGGTTCTTGGAAGGGGATTATTACTAGGTTATGGCCCAACACTAAGTATGTTGATGTTATTGTCACTGGAACTATGTCTCAGTATATTCCAACATTGGATTACTATAGCAATGGTCTCCCTCTTGTGTGTACCATGTATGCTTCCTCTGAGTGTTATTTTGGCCTCAACTTAAACCCTTTATGTGAACCAAGTGAGGTGTCTTACACCCTCATTCCCACCATGGCCTACTTTGAGTTCTTGCCCCTTAATGAGATAAATGGACACACCAATTCAGTTTCTCACTCAGAGCAAGAACATTTGGTTGATCTCGTAGATGTAGAGTTGGGTCAGGAATATGAGCTTGTGGTCACCACTTATGCAGGCCTTTATAGGTACCGGGTTGGTGATATACTCCGTGTAGCAGGATTCAAGAATAAGGCTCCTCAATTTAACTTTATATGCCGCAAGAATGTGATTTTGAGCATTGATTCTGACAAGACAGATGAAGTTGAGCTACAAAATGCTGTGAAGAATGGAGCTAACCATCTAGCACAATTTGGAGCATCCCTCACAGAATACACAAGCTGTGTCAACACATCCACTATCCCAGGCCACTACGTATTGTACTGGGAGATTAGCATGATTGATAATGGCCAAACCCTAATTCCTGCTTCAGTCTTTGAAGAGTGTTGTTTTGTGGTTGAAGGGTCTCTCAATAGCGTGTATCGCCAAGGTAGGGTATCAGAGTCCATTGGACCATTGGAAATCAAGATAGTTGAGAATGGAACATTTGACAAGCTTATGGATTTCGCTCTTAGCCAGGGTGCTTCCATAAATCAGTATAAAACACCTCGTTGCGTGAAATATTTTCCCATTGTTGATCTTCTTAATTCCAAGACAGTTTCCAATTACTTCAGTCCAAAATGTCCAAAGTGGGTTCCTGCTCATAAGAAGTGGTACCCTTGA 1860 0.4237 MPEAPNHYHLCSKPNGQLDDDGSNTNVIKDNNTKALKYIEDVTSNTDEIQERVLAEILSSSAHVEYLQRHGLDGHTDRDTFKKIMPLVTYEDLKPDIDRIANGDTSPILCSKPISEFLTSSGTSGGERKLMPTIEDELKRRSLLYSLLMPVMDQFVPNLDKGKGMYFLFIKSEAKTPGGLLARPVLTSYYKSSHFKNRTHGHDPYTNYTSPIETILCLDSYQSMYSQLLCGLYQNHQVLRVGAVFASGFIRAIKFLEKHWLCLCNDIRNGNINPEITDSSVRDAIMEILKPNPKLADFIEAECKKGSWKGIITRLWPNTKYVDVIVTGTMSQYIPTLDYYSNGLPLVCTMYASSECYFGLNLNPLCEPSEVSYTLIPTMAYFEFLPLNEINGHTNSVSHSEQEHLVDLVDVELGQEYELVVTTYAGLYRYRVGDILRVAGFKNKAPQFNFICRKNVILSIDSDKTDEVELQNAVKNGANHLAQFGASLTEYTSCVNTSTIPGHYVLYWEISMIDNGQTLIPASVFEECCFVVEGSLNSVYRQGRVSESIGPLEIKIVENGTFDKLMDFALSQGASINQYKTPRCVKYFPIVDLLNSKTVSNYFSPKCPKWVPAHKKWYP* 620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g1122 619 PANTHER INDOLE-3-ACETIC ACID-AMIDO SYNTHETASE 24 617 - -
Apr3g1122 619 MobiDBLite consensus disorder prediction 1 25 - -
Apr3g1122 619 PANTHER GH3 DOMAIN-CONTAINING PROTEIN 24 617 IPR004993 -
Apr3g1122 619 Pfam GH3 auxin-responsive promoter 39 586 IPR004993 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g1122 Apr-Chr3 25792213 25795070 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g1122 23 604 EF-hand Containing Proteins AT1G23160 49.492 0.0 561
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g1122 K14487 - gmx:100819676 1105.12
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g1122 3 25792213 25795070 Apr3g1122 3 25792213 25795070 ECH
Apr2g1981 2 25214565 25217181 Apr3g1122 3 25792213 25795070 PCT