Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g1981 ATGCCTGAGGCTCCAAAGCACTCATGCAAGGTTAACCTTGATGATGCTGGTAGTAATACTAGTATTATCCAAGATAACAATGATAGAGCACTCAAATACATTGAAGAGGTCACTAGCAGCGCTGATGAAATTCAAGTAAAGGTCTTAGCCCAGATCCTTTCTCGTAGTGCCAACGTTGAGTACCTCCAACGCCATGGCCTAGATAGCCGAACTGACAAAAACACTTTCAAGAAGGTCATGCCCGTCGTCACTTACGAAGATTTAAAGCCAGATATTGATCGCATAGCCAACGGTGATACCTCCCCAATTTTATGTTCCAAACCCATATCAGAGTTTCTGACCAGCTCTGGAACATCTGGTGGGGAGAGAAAATTGATGCCAACAATCGAAGAGGAACTAGAGAGGAGATCATTGCTTTATAGCCTGTTGATGCCAGTGATGGATCAATTTGTGGGTGGTTTGGACAAGGGCAAAGGAATGTACTTTTTGTTCATAAAATCAGAAGCCAAAACCCCTGGTGGACTCTTTGCTCGTCCAGTTTTGACCAGCTATTACAAAAGCTCACATTTCAAGAACCGCAATCACGATCTCTACACAAACTACACCAGCCCCAATGAGACCATTCTCTGCCCTGACTCTTACCAGAGCATGTATTCTCAGTTGCTTTGTGGGCTTTGTCAAAATGAGGAAGTTCTTCGTGTTGGGGCTGTTTTCGCTTCTGGCTTCATTCGTGCCCTTAAGTTCCTTGAAAATCATTTTGTTTCTTTGTGTAATGACATAAGAACGGGTACCTTAGACTCTAAAATCACTGACACGTCAGTCAGAATGGCTGTTATGAAAGTACTCAAACCAAATCCCAAGCTTGCGGCTTTCATAGAAGCCGAATGCATCAAAGGGTCTTGGAAGGGGATCATTACTAGGTTATGGCCAAATACCAAGTATGTTGATGTTATTGTCACAGGAACCATGTCTCAGTACATTCCCATATTGGATTTTTATAGCAATGGTCTCCCTCTTGTTTGCACCATGTATGCTTCTTCTGAGTGTTATTTCGGCCTTAATTTGAACCCCTTGTCTGACCCAAGTGAGGTGTGTTACACCCTCATTCCCACCATGGCCTACTTTGAGTTCTTGCCCCTCAACAAGATAAGCGGTCATACTGATTCAATTTCTCACTTGGAGCAAGAACATTTGGTGGATCTTACCGATGTAAAGTTGGGTCAAGAGTATGAGCTCGTAGTCACCACTTATTCAGGCCTTTATAGGTACCGGGTTGGTGACATACTCCGGGTAGCTGGATTCAAAAACAAGGCTCCTCAATTTTACTTTGTGTGCCGAAAGAACGTGGTACTGAGCATTGATTCTGACAAAACCGATGAAGTTGAGTTACAAAATGCAGTGAAAAGTGCAGCTCAGCATCTTGTGCAATTTGGTGCATCGCTAAATGAATACACAAGCAGCGCAGACACATCCACAATCCCAGGCCACTACGTGCTGTACTGGGAGATTAACACGAGTGAAGAAACTCCAATTCCTGCTTCCATTTTCGAGAACTGTTGCCATGCAGTTGAAGAATCTCTTAACACTGTGTATCGCCAAGGCAGGGTATCAGAGTCTATAGGACCCTTGGAAATCAAGATGGTGGAGAATGGAACCTTTGACAAGCTCATGGATTTTGCTCTGAGCCAGGGTGCATCTATAAATCAGTACAAGACACCTCGATGTGTGAAATATGCACCCATTCTAGAGCTTCTAAACTCTAAAGTTGTTTCTACTCACTTCAGTCCAAGATGCCCGAAGTGGGTTCCTGGTCACAAGAAATGGTGCAACCTTCACTGA 1839 0.4383 MPEAPKHSCKVNLDDAGSNTSIIQDNNDRALKYIEEVTSSADEIQVKVLAQILSRSANVEYLQRHGLDSRTDKNTFKKVMPVVTYEDLKPDIDRIANGDTSPILCSKPISEFLTSSGTSGGERKLMPTIEEELERRSLLYSLLMPVMDQFVGGLDKGKGMYFLFIKSEAKTPGGLFARPVLTSYYKSSHFKNRNHDLYTNYTSPNETILCPDSYQSMYSQLLCGLCQNEEVLRVGAVFASGFIRALKFLENHFVSLCNDIRTGTLDSKITDTSVRMAVMKVLKPNPKLAAFIEAECIKGSWKGIITRLWPNTKYVDVIVTGTMSQYIPILDFYSNGLPLVCTMYASSECYFGLNLNPLSDPSEVCYTLIPTMAYFEFLPLNKISGHTDSISHLEQEHLVDLTDVKLGQEYELVVTTYSGLYRYRVGDILRVAGFKNKAPQFYFVCRKNVVLSIDSDKTDEVELQNAVKSAAQHLVQFGASLNEYTSSADTSTIPGHYVLYWEINTSEETPIPASIFENCCHAVEESLNTVYRQGRVSESIGPLEIKMVENGTFDKLMDFALSQGASINQYKTPRCVKYAPILELLNSKVVSTHFSPRCPKWVPGHKKWCNLH* 613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g1981 612 PANTHER GH3 DOMAIN-CONTAINING PROTEIN 19 608 IPR004993 -
Apr2g1981 612 PANTHER INDOLE-3-ACETIC ACID-AMIDO SYNTHETASE 19 608 - -
Apr2g1981 612 Pfam GH3 auxin-responsive promoter 34 577 IPR004993 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g1981 Apr-Chr2 25214565 25217181 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g1981 20 595 EF-hand Containing Proteins AT1G23160 50.000 0.0 561
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g1981 K14487 - gmx:100818961 1051.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g1981 2 25214565 25217181 Apr2g1981 2 25214565 25217181 ECH
Apr2g1981 2 25214565 25217181 Apr3g1122 3 25792213 25795070 PCT