Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g1106 ATGGTCAACATTGAGCATCCAGCACGTCTTGAGGGAAAATTTGCTGCAATAGTTGTCTGCTGGCTTCTAGGCAATGGATGTCTTTTCTCCTGGAACAGTATGCTGACTATAGAAGATTACTATGTCTACTTGTTTCCGAAATACCACCCGTCTAGGGTGCTGACTCTTGTATATCAGCCATTTGCTGTTGGAACACTTGCAATACTGTCTTACAAAGAGGATAAAATAAACACAAGGATAAGAAACCTATTTGGATATTCTCTTTTCTTCATAAGCACTTTGTTGGTGTTAGTTTTGGATTTGGCAACATCTGGTAAAGGAGGACTTGGAACTTTTATTGGTATATGTGCAATTAGTGGTGCATTTGGAATAGCAGATGCTCATACACAGGGTGGAATGGTAGGAGACCTGTCCTACATGCTTCCAGAATTCATTCAGTCTTTCCTTGCTGGTGCAGCAGCATCAGGTGCACTAACATCTGCTGTGAGGTTAATTACAAAAGCAGCATTTGAGAATTCTAAGGATGGTCTTCGCAAAGGAGCCATTCTGTTCTTTGCCATATCGACGTTCTTTGAGCTTATTTGTGTTCTTCTCTATGCGTTTGTCTTTCCTAAATTACCAATTGTGAAGTACTACCGTTCCAAAGCAGCATCTGAAGGATCCAAAACCGTTTCAGCCGACCTCGCCGCGGCGGGTATCCAGAAACCATCTGGAGGAGCCATGGAAGATGAACAACAACAAGAGCGCAAAGGAAATATGCAATTGTTATTGGAAAACATTGATTATGCACTTGATTTGTTCCTAATATATTCGCTAACACTGTCAATTTTCCCTGGATTCTTATCAGAAGATACAGGATCACACAGTTTGGGCGCTTGGTATGCTCTTGTTTTAATTGCTATGTATAATGTGTGTGATCTGATCGGAAGATACATTCCACTTTGGAAAACCCTGAAGTTGGAGTCCCGAAAGTTGATCACAACAGCAACTATTTGTCGCTTTTTATTTGTGCCAGCATTTTATTTCACAGCAAAATATGGTACACAGGGTTGGATGATAATGTTGACATCTTTTTTGGGGTTATCCAATGGTTACCTTACTGTTTGTGTTCTCACTTCTGCACCCAAAGGTTATAAGGGACCAGAACAAAATGCCTTAGGAAACATATTAGTGTTGTTTCTTCTTGGAGGTATTTTTGCAGGAGTAACACTTGACTGGTTGTGGTTAATAGGTAAAGGGTGGTGA 1245 0.4064 MVNIEHPARLEGKFAAIVVCWLLGNGCLFSWNSMLTIEDYYVYLFPKYHPSRVLTLVYQPFAVGTLAILSYKEDKINTRIRNLFGYSLFFISTLLVLVLDLATSGKGGLGTFIGICAISGAFGIADAHTQGGMVGDLSYMLPEFIQSFLAGAAASGALTSAVRLITKAAFENSKDGLRKGAILFFAISTFFELICVLLYAFVFPKLPIVKYYRSKAASEGSKTVSADLAAAGIQKPSGGAMEDEQQQERKGNMQLLLENIDYALDLFLIYSLTLSIFPGFLSEDTGSHSLGAWYALVLIAMYNVCDLIGRYIPLWKTLKLESRKLITTATICRFLFVPAFYFTAKYGTQGWMIMLTSFLGLSNGYLTVCVLTSAPKGYKGPEQNALGNILVLFLLGGIFAGVTLDWLWLIGKGW* 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g1106 414 SUPERFAMILY MFS general substrate transporter 154 407 IPR036259 -
Apr3g1106 414 PANTHER EQUILIBRATIVE NUCLEOSIDE TRANSPORTER 4 413 IPR002259 GO:0005337|GO:0016021|GO:1901642
Apr3g1106 414 PIRSF ENT 4 412 IPR002259 GO:0005337|GO:0016021|GO:1901642
Apr3g1106 414 Pfam Nucleoside transporter 123 408 IPR002259 GO:0005337|GO:0016021|GO:1901642
Apr3g1106 414 PANTHER EQUILIBRATIVE NUCLEOTIDE TRANSPORTER 2 4 413 IPR030200 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g1106 Apr-Chr3 25625123 25632657 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g1106 5 412 Organic Solute Cotransporters AT4G05120 70.343 0.0 593
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g1106 K15014 - gmx:100784933 737.643
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g1106 3 25625123 25632657 Apr3g1106 3 25625123 25632657 ECH
Apr2g1970 2 25072875 25076435 Apr3g1106 3 25625123 25632657 PCT