Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g1970 ATGTTCAACAGTGAGCTTCCACGAGTTGAGGGAAAATATGCTGCAGTTGTGGTCTGCTGGCTTCTTGGCATAGGATGTCTTTTGTCATGGAACAGTATGTTGACAATAGAAGATTACTACATGGAATTGTTTCCGAAATACCACCCCTCTAGGGTGCTCACTCTTGTATATCAGCCATTTGCTGTTGGAACACTTGCAATACTGGCTTATAATGAGGCAAAACTCAATACAAGAATGAGGATTCTGTTTGGATATATTCTTTTTTTCATAAGCACTTTGTTGGTGTTAATTTTGAATTTAGCAACATCTGGTAAAGGAGGACTTGGACTTTTCATTGGTATATGTGCAATTAGTGGTGCTTTTGGAGTTGCAGATGCTCATGCTCAAGCAGGATTGGTAGGAGACCTGTCCTACATGCAACCAGAATTCATTCAGTCTTTCCTTACTGGTTTGGCAGCATCCGGTGCATTAACCTCTGCTTTGAGGTTAATCACAAAGGCAGCATTTGAGAATTCTAAGGATGGTCTTCGCAAGGGAGCAATTCTATTCTTTGCCATATCAACATTTTTTGAGCTTCTTTGTGTTCTTCTCTATGCATATATTTTTCCTAAACTACCAATTGTGAAGTACTACCGCTCAAAGGCAGCATCAGAAGGATCCAAAACTGTTTCAGCTGACCTTGCAGCTGGTGGCATTCGGACACTACCTGGAGGAGACAGTGAATATACAAAGGAACCTGAGAGAAAAGGAAACAAGCAATTGTTATTGGAAAACATCGATTATGCACTTGATATGTCCCTAATCTATGTGTTAACACTCTCTATTTTCCCCGGTTTCCTGTCAGAAGATACTGGATCACATAGTTTGGGCACTTGGTATGCTCTCGTTTTAATTGCAATGTATAATGTGTGGGATCTGATAGGAAGATACATTCCAGTCTTGAAATTCTTGAAGTTGGAGTCCCGAAAGTTGATCACAGTAGCAATTCTTAGTCGTTTTTTACTTGTTCCAGCATTTTATTTCACTGCAAAGTATGGTGATCAAGGTTGGATGATAATGTTAACGTCCTTCTTGGGACTATCCAATGGTTACCTCACTGTGTGTGTTCTAACAGCTGCACCAAAAGGTTACAAGGGTCCAGAACAAAATGCCTTGGGAAACCTATTGGTTTTGTTTCTTGTTGGAGGGATTTTTGCTGGGGTCACACTTGATTGGCTGTGGTTAATTGGTAAAGGGTGGTGA 1242 0.4058 MFNSELPRVEGKYAAVVVCWLLGIGCLLSWNSMLTIEDYYMELFPKYHPSRVLTLVYQPFAVGTLAILAYNEAKLNTRMRILFGYILFFISTLLVLILNLATSGKGGLGLFIGICAISGAFGVADAHAQAGLVGDLSYMQPEFIQSFLTGLAASGALTSALRLITKAAFENSKDGLRKGAILFFAISTFFELLCVLLYAYIFPKLPIVKYYRSKAASEGSKTVSADLAAGGIRTLPGGDSEYTKEPERKGNKQLLLENIDYALDMSLIYVLTLSIFPGFLSEDTGSHSLGTWYALVLIAMYNVWDLIGRYIPVLKFLKLESRKLITVAILSRFLLVPAFYFTAKYGDQGWMIMLTSFLGLSNGYLTVCVLTAAPKGYKGPEQNALGNLLVLFLVGGIFAGVTLDWLWLIGKGW* 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g1970 413 PIRSF ENT 5 411 IPR002259 GO:0005337|GO:0016021|GO:1901642
Apr2g1970 413 PANTHER EQUILIBRATIVE NUCLEOSIDE TRANSPORTER 5 412 IPR002259 GO:0005337|GO:0016021|GO:1901642
Apr2g1970 413 PRINTS Delayed-early response protein/equilibrative nucleoside transporter signature 103 123 IPR002259 GO:0005337|GO:0016021|GO:1901642
Apr2g1970 413 PRINTS Delayed-early response protein/equilibrative nucleoside transporter signature 348 364 IPR002259 GO:0005337|GO:0016021|GO:1901642
Apr2g1970 413 PRINTS Delayed-early response protein/equilibrative nucleoside transporter signature 385 409 IPR002259 GO:0005337|GO:0016021|GO:1901642
Apr2g1970 413 Pfam Nucleoside transporter 122 407 IPR002259 GO:0005337|GO:0016021|GO:1901642
Apr2g1970 413 PANTHER EQUILIBRATIVE NUCLEOTIDE TRANSPORTER 2 5 412 IPR030200 -
Apr2g1970 413 SUPERFAMILY MFS general substrate transporter 15 406 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g1970 Apr-Chr2 25072875 25076435 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g1970 3 411 Organic Solute Cotransporters AT4G05120 70.416 0.0 601
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g1970 K15014 - gmx:100798899 728.398
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g1970 2 25072875 25076435 Apr2g1970 2 25072875 25076435 ECH
Apr2g1970 2 25072875 25076435 Apr3g1106 3 25625123 25632657 PCT