Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g1102 ATGGCTTCTCAGTTTCTCGACAACTTCAAGATTCCCGATTACATTCTCGTACCTGGTTCCAAGGTTGAGAATGCCGCTCATGTCCCGCTGTGTCCGGTTCTGGTTTTCGTCAACTCCAAGAGTGGGGGTCAGCTCGGTGGTGATATCTTGAAAACCTATCGCACTCTTCTTAATCAAAATCAGGTTTTTGATTTGGGGGAACATGCTCCTGATAAGGTGCTCAGAACAGTTTATGCCAATTTGGAAAGCCTCAAGCTACGTCGTGATCAGTTTGCTATAAAGATCGTCGAGAGGTTGAAGTTAATTGTTGCAGGGGGTGATGGAACAGCAGGATGGCTTCTTGGAGTTGTTTGTGATCTCAGATTATCTCATTCTCCACCAATAGCCACCGTTCCCTTGGGCACAGGGAATAATCTACCTTTTGCATTTGGTTGGGGGAAGAAAAACCCGGGGACAGATCAAGGCTCAGTTGAGGCATTTTTAGATCAAGTCATGAAAGCAAAGGAAATGAAAATTGACAACTGGCACATTCTCATGAGAATGAGAGCTCCTAAAGAAGGTTCCTGTGACCCAATTCCACCACTTGAGCTACCACATTCTTTGCATGCCTTCCATCGTGTGTCTGAAGCAGATGAACTTAATATGGAAGGTTGCCACACATTTCGTGGGGGATTTTGGAATTACTTCAGCATGGGAATGGATGCTCAAGTGTCTTATGCATTTCATTCAGAACGAAAGCAGAATCCTGAAAAATTTAAAAACCAGTTGATTAATCAGACTACTTATGCTAAGCTTGGATGCACACAAGGATGGTTTTTTGCTTCTCTGTTGCATCCTGCTGACAGGAACATAGCACAACTTGCAAAAGTAAAATTCATGAAAAGGCATGGCGAATGGCAAGACCTAGTCATACCTCCCAGCATCCGGTCAATTATATGTCTTAACTTGCCCAGCTTTTCTGGTGGACTGAATCCATGGGGAACACCAAACAGCAAGAAGCAGCGTGATAGAGATCTGACACCGCCATTTGTCGATGATGGCCTTATAGAGGTTGTTGGTTTTAGAAATGCATGGCATGGGCTTGTTTTGCTTGCTCCAAAAGGACATGGGACTCGTCTTGCTCAGGCACACAGAATCCGGTTTGAATTTCACAAAGGTGCAGCAGATCATACATTCATGAGGATTGATGGGGAACCTTGGAAGCAACCTCTTCCAGTTGATGATGATACTGTTGTGGTAGAGATTTCTCACCTTGGCCAGGTTAACATGCTTGCCACTCATAATTGCAAGTCTAAAAGTGTGTACGATCCATCATCACCACATCGTGGGGACGAGGAAGACGACAGTGATGAAGAAGACTCTATAGCAGAGGAATTTCGGAAGTTTGGTGCAGCAGATACATTTAAAATCCCAGACCATGTTGAGCTTTCTCATCTTAGTTAG 1443 0.4428 MASQFLDNFKIPDYILVPGSKVENAAHVPLCPVLVFVNSKSGGQLGGDILKTYRTLLNQNQVFDLGEHAPDKVLRTVYANLESLKLRRDQFAIKIVERLKLIVAGGDGTAGWLLGVVCDLRLSHSPPIATVPLGTGNNLPFAFGWGKKNPGTDQGSVEAFLDQVMKAKEMKIDNWHILMRMRAPKEGSCDPIPPLELPHSLHAFHRVSEADELNMEGCHTFRGGFWNYFSMGMDAQVSYAFHSERKQNPEKFKNQLINQTTYAKLGCTQGWFFASLLHPADRNIAQLAKVKFMKRHGEWQDLVIPPSIRSIICLNLPSFSGGLNPWGTPNSKKQRDRDLTPPFVDDGLIEVVGFRNAWHGLVLLAPKGHGTRLAQAHRIRFEFHKGAADHTFMRIDGEPWKQPLPVDDDTVVVEISHLGQVNMLATHNCKSKSVYDPSSPHRGDEEDDSDEEDSIAEEFRKFGAADTFKIPDHVELSHLS* 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g1102 480 MobiDBLite consensus disorder prediction 431 455 - -
Apr3g1102 480 SUPERFAMILY NAD kinase/diacylglycerol kinase-like 30 406 IPR016064 -
Apr3g1102 480 SMART dagk_c4a_7 32 175 IPR001206 GO:0016301
Apr3g1102 480 PANTHER DIACYLGLYCEROL KINASE 3 480 IPR037607 GO:0004143|GO:0007165
Apr3g1102 480 PANTHER DIACYLGLYCEROL KINASE 3 480 - -
Apr3g1102 480 Gene3D - 224 407 - -
Apr3g1102 480 PIRSF DAG_kinase_plant 2 430 IPR016961 GO:0004143
Apr3g1102 480 ProSiteProfiles DAG-kinase catalytic (DAGKc) domain profile. 28 181 IPR001206 GO:0016301
Apr3g1102 480 SMART dagk_c4b_2 227 399 IPR000756 GO:0004143|GO:0007205
Apr3g1102 480 Pfam Diacylglycerol kinase accessory domain 225 399 IPR000756 GO:0004143|GO:0007205
Apr3g1102 480 Pfam Diacylglycerol kinase catalytic domain 32 156 IPR001206 GO:0016301
Apr3g1102 480 Gene3D - 32 178 IPR017438 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g1102 Apr-Chr3 25598101 25602614 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g1102 3 478 Acyl Lipid Metabolism Gene Families AT2G20900 76.446 0.0 763
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g1102 K00901 - gmx:100817198 876.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g1102 3 25598101 25602614 Apr3g1102 3 25598101 25602614 ECH
Apr2g1962 2 24994591 25001263 Apr3g1102 3 25598101 25602614 PCT