Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g1962 ATGGCTTCTCGCACTTACGACTCTAACTTCTTGAAGCAATTTTGGATCCCCAACCACGTTCTCATGCCGGAATCTAAGGTTGAAGATAGCGTGATCGATCCTGATGGACCTAAGTGTCCGGTGCTCGTTTTCGTTAACTCAAAGAGCGGTGGTCAGCTAGGAGGGAGCCTCTTGGAAACGTATCGTGCGCTTCTCAGCGAAAAACAGGTTTTTGACTTAGGGGAAGAGGCTCCTGATAAGGTTCTCAGCAGAATTTATGCTAATTTGGAAAATCTGAAGGTCCAGGGTGATCAATTTGCTATAAGGACGATGGAAAAGTTGAAATTAATTGTTGCAGGGGGTGATGGAACGGCTGGATGGCTACTTGGAGTTGTTTGTGATCTCAAATTATCTCATCCGCCACCCATAGCCACAGTTCCCTTGGGCACAGGGAACAATCTACCATTTGCATTTGGTTGGGGGAAGAAGAACCCAGGGACAGATGAACAATCGGTCATGTCATTTCTAGAACAAGTAATGAAAGCTAAGGAAATGAAAATAGACAACTGGCACATTCTTATGCGGATGAGGGCTCCAAAGCAAGGTTCCTGTGATCCAATTGCACCTCTTGAGTTACCACATTCTTTGCATGCTTTCCATCGTGTATCTGAGGCAGATGAACTCAATATGGAAGGATGCCATACTTTTCGTGGGGGATTTTGGAATTACTTCAGCATGGGAATGGATGCTCAAGTGTCTTATGCATTTCATTCTGAACGAAAGTTGCATCCTGAAAAATTCAAAAATCAGTTGGTCAATCAGAGTACTTATGCTAAGCTTGGATGCACACAAGGATGGTTTTTTGCTCCTCTGTTCCATCCTCCTTCCAGGAACATAGCACATCTTGCAAAAGTAAAGGTCATGAAATCGCATGGTCATTGGGAAGACCTGCACATACCTTCCAGCATCAGGTCAATTGTATGCCTTAACTTGCCTAGCTTCTCTGGTGGATTAAATCCATGGGGTACGCCAAACAAGAAGAAGAGTAGTGATAGAGATTTGACACCACCTTATGTAGATGATGGCCTTATAGAGGTGGTTGGTTTTAGAGATGCTTGGCATGGGCTTGTTTTGCTTGCTCCAAATGGACATGGAACTCGTCTTGCTCAGGCACACAGAATCCGCTTTGAGTTTCACAAAGGTGCGGCAGATCACACATTCATGAGGATTGACGGGGAACCTTGGAAACAACCCCTACCGGTTGACGATGATACTGTTTTGGTGGAGATATCTCACCATGGCCAGGTTAACATGCTCGCCACTCATGATTCCAAGGCTAAAAGTGTGAATGATCCATCATCACCATACCATAATGATGTAGAGGAAGATGATAGTGATGATGAAGACTCCAAAGCAGATGAATTCCGGAAGTTTGGTGCGGCAGATACATTTAAAATCCCAGATGAAGTAGACCTTGCTCATCTTAGTTAG 1470 0.4442 MASRTYDSNFLKQFWIPNHVLMPESKVEDSVIDPDGPKCPVLVFVNSKSGGQLGGSLLETYRALLSEKQVFDLGEEAPDKVLSRIYANLENLKVQGDQFAIRTMEKLKLIVAGGDGTAGWLLGVVCDLKLSHPPPIATVPLGTGNNLPFAFGWGKKNPGTDEQSVMSFLEQVMKAKEMKIDNWHILMRMRAPKQGSCDPIAPLELPHSLHAFHRVSEADELNMEGCHTFRGGFWNYFSMGMDAQVSYAFHSERKLHPEKFKNQLVNQSTYAKLGCTQGWFFAPLFHPPSRNIAHLAKVKVMKSHGHWEDLHIPSSIRSIVCLNLPSFSGGLNPWGTPNKKKSSDRDLTPPYVDDGLIEVVGFRDAWHGLVLLAPNGHGTRLAQAHRIRFEFHKGAADHTFMRIDGEPWKQPLPVDDDTVLVEISHHGQVNMLATHDSKAKSVNDPSSPYHNDVEEDDSDDEDSKADEFRKFGAADTFKIPDEVDLAHLS* 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g1962 489 Pfam Diacylglycerol kinase catalytic domain 40 165 IPR001206 GO:0016301
Apr2g1962 489 Gene3D - 232 415 - -
Apr2g1962 489 MobiDBLite consensus disorder prediction 434 467 - -
Apr2g1962 489 SMART dagk_c4a_7 40 183 IPR001206 GO:0016301
Apr2g1962 489 PANTHER DIACYLGLYCEROL KINASE 6 489 IPR037607 GO:0004143|GO:0007165
Apr2g1962 489 PIRSF DAG_kinase_plant 1 438 IPR016961 GO:0004143
Apr2g1962 489 SUPERFAMILY NAD kinase/diacylglycerol kinase-like 38 414 IPR016064 -
Apr2g1962 489 MobiDBLite consensus disorder prediction 434 448 - -
Apr2g1962 489 Gene3D - 39 186 IPR017438 -
Apr2g1962 489 ProSiteProfiles DAG-kinase catalytic (DAGKc) domain profile. 36 189 IPR001206 GO:0016301
Apr2g1962 489 PANTHER DIACYLGLYCEROL KINASE 6 489 - -
Apr2g1962 489 SMART dagk_c4b_2 235 407 IPR000756 GO:0004143|GO:0007205
Apr2g1962 489 Pfam Diacylglycerol kinase accessory domain 233 407 IPR000756 GO:0004143|GO:0007205
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g1962 Apr-Chr2 24994591 25001263 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g1962 8 482 Acyl Lipid Metabolism Gene Families AT2G20900 77.871 0.0 769
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g1962 K00901 - gmx:100813809 902.123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g1962 2 24994591 25001263 Apr2g1962 2 24994591 25001263 ECH
Apr2g1962 2 24994591 25001263 Apr3g1102 3 25598101 25602614 PCT