Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g1096 ATGGCGGTGGACAGTGAAAAAACGGGCTCTGATGGGAAAGTTTGGAGCTTTTGTAGCATGCCATTTTGGCAAACAACTCATGCTTCTTCATCTTCTTCTTCAACATCTTCTATGCATAGTGTTCACAATCAAAGCCAGATTCTTCAGTCTCTTGATAGATCAACTCAGCAACCTTCGAACTCTGTTTCTTCAGTAGCAAAGTCTTTTCTCCCTACAAGGAGAAGATTCCGTCTTGATCCTCCCAACAAGCTCTATTTTCCATATGAACCAGGTAAGCAAGTTAGGAGCGCCATCGCAATTAAAAACACTTGCAAGTCTCATGTGGCTTTCAAGTTTCAAACAACTGCACCCAAGAGTTGTTATATGCGCCCTCCAGGTGGTATTCTTGCGCCTGGTGAAATGTTTAAGTTTGTGGAGCCACCAGAGAACAATGAGAAACCAATTGACCAAAAAAGCAGGGTTAAGTTTAAAATTATGAGCTTAAAAGTGAAAGGTGAAATGGACTATGTACCAGAACTGTTTGAAGAGCAAAGGGATCATGTAGCAGTGGAGCAAATTTTGCGTGTGGTTTTTCTGGACCCTGAAATCCCTAGCATTGCTCTGGATAAGCTTAAACGACAACTGGCCGAGGCTGAGGCTGCATTGGAAGCAAGAAAGAAGCCCCCAGAGGAGACAGGTCCTCGAATAGCTGGGGAAGGACTTGTTATAGATGAATGGAAAGAAAGAAGAGAAAGATACCTGGCTAGGCAACAGGTGGAAGTGGTTGATTCAATGTAA 777 0.4324 MAVDSEKTGSDGKVWSFCSMPFWQTTHASSSSSSTSSMHSVHNQSQILQSLDRSTQQPSNSVSSVAKSFLPTRRRFRLDPPNKLYFPYEPGKQVRSAIAIKNTCKSHVAFKFQTTAPKSCYMRPPGGILAPGEMFKFVEPPENNEKPIDQKSRVKFKIMSLKVKGEMDYVPELFEEQRDHVAVEQILRVVFLDPEIPSIALDKLKRQLAEAEAALEARKKPPEETGPRIAGEGLVIDEWKERRERYLARQQVEVVDSM* 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g1096 258 ProSiteProfiles Major sperm protein (MSP) domain profile. 75 192 IPR000535 -
Apr3g1096 258 SUPERFAMILY PapD-like 64 199 IPR008962 -
Apr3g1096 258 Pfam MSP (Major sperm protein) domain 76 181 IPR000535 -
Apr3g1096 258 PANTHER VESICLE-ASSOCIATED MEMBRANE-PROTEIN-ASSOCIATED PROTEIN-RELATED 34 256 - -
Apr3g1096 258 MobiDBLite consensus disorder prediction 25 66 - -
Apr3g1096 258 Gene3D Immunoglobulins 72 195 IPR013783 -
Apr3g1096 258 PANTHER VESICLE-ASSOCIATED MEMBRANE PROTEIN-ASSOCIATED PROTEIN 34 256 IPR016763 GO:0005789
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g1096 Apr-Chr3 25572922 25575412 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g1096 - - gmx:100820576 452.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g1096 3 25572922 25575412 Apr3g1096 3 25572922 25575412 ECH
Apr2g1954 2 24948174 24951193 Apr3g1096 3 25572922 25575412 PCT