Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g1954 ATGGCGGTGGAGAATGAAAAATCAGGGTCTGATGGGAAGCAAAACCAGAATAATCTTCAGTCTCTTGATAGATCCACTCATCAGTCTTCGACCACGGTTTCATCTATGGCCAAGTCTCTGCTCCCTACAAGGAGGAGGCTCCGTCTTGATCCACCCAACAAACTATACTTTCCCTATGAACCTGGTAAGCAAGTTAGGAGTGCAATCGCAATTAAAAACACTTGCAAGTCTCATGTAGCCTTCAAGTTTCAAACAACTGCACCCAAGAGTTGTTATATGCGCCCACCAGGGGGTATTCTTGCCCCTGATGAAAGTATAATTGCCACTGTATTCAAGTTTGTGGAGCCGCCAGAGAACAATGAGAAATCAAATGATCAAAAAAGCAAGGTTAAGTTTAAAATCTTGAGCCTAAAAGTACAAGGTGAAATGGACTATGTACCAGAACTGTTTGATGAACAAAGAGATCAAGTGACAGTAGAGCAAATTCTGCGGGTTATTTTTCTGGACCCTGAACGGCCTAGCCCTGCCCTGGAAAAGCTTAAACGCCAGTTGGCTGAGGCTGAGGCTGCACTTGAAGCACGGAAAAAACCCCATGAGGAGACAGGTCCTCGAGTAGCCGGGGAGGGACTTGTCATAGATGAATGGAAAGAAAGAAGAGAAAGATACCTGGCACGGCAACAGGTTGAAGGTGGTGTTGATTCCGTGTGA 708 0.4548 MAVENEKSGSDGKQNQNNLQSLDRSTHQSSTTVSSMAKSLLPTRRRLRLDPPNKLYFPYEPGKQVRSAIAIKNTCKSHVAFKFQTTAPKSCYMRPPGGILAPDESIIATVFKFVEPPENNEKSNDQKSKVKFKILSLKVQGEMDYVPELFDEQRDQVTVEQILRVIFLDPERPSPALEKLKRQLAEAEAALEARKKPHEETGPRVAGEGLVIDEWKERRERYLARQQVEGGVDSV* 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g1954 235 MobiDBLite consensus disorder prediction 8 39 - -
Apr2g1954 235 PANTHER VESICLE-ASSOCIATED MEMBRANE PROTEIN-ASSOCIATED PROTEIN 13 230 IPR016763 GO:0005789
Apr2g1954 235 PANTHER VESICLE-ASSOCIATED MEMBRANE-PROTEIN-ASSOCIATED PROTEIN-RELATED 13 230 - -
Apr2g1954 235 Gene3D Immunoglobulins 42 172 IPR013783 -
Apr2g1954 235 ProSiteProfiles Major sperm protein (MSP) domain profile. 46 168 IPR000535 -
Apr2g1954 235 SUPERFAMILY PapD-like 35 178 IPR008962 -
Apr2g1954 235 Coils Coil 177 197 - -
Apr2g1954 235 Pfam MSP (Major sperm protein) domain 47 157 IPR000535 -
Apr2g1954 235 MobiDBLite consensus disorder prediction 1 45 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g1954 Apr-Chr2 24948174 24951193 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g1954 - - gmx:100816998 377.867
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g1954 2 24948174 24951193 Apr2g1954 2 24948174 24951193 ECH
Apr2g1954 2 24948174 24951193 Apr3g1096 3 25572922 25575412 PCT